| Protein: | gi|19699142, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19699142, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..18] | [364..101] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MERLLQPSSS SSSISPSKFP SRTSPFLPRL RSSGLSFVST HRPESRRVSS ISCNSSQIPS 60
61 LYTPIGSNTT NNSFNGSPKS DESKPNPGFL TRIATSASEQ RKTLSTGTVI LISAVAVLLL 120
121 NPLLA
|
| Detection Method: |  |
| Confidence: | 12.154902 |
| Match: | 1p6tA |
| Description: | Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.246147507070597 | bayes_pls_golite062009 |
|
Region A: Residues: [126-365] |
1 11 21 31 41 51
| | | | | |
1 PPAFASFQTA AKSGWLTSAW TGFLAGCLHT LSGPDHLAAL APLSIGRSKM ESAAVGALWG 60
61 CGHDAGQVIF GLLFLLLKDR LHIEVLQTWG TRIVGLTLVI IGAMGIKEAS EIPEPCVALE 120
121 TDISMVSTEK EALPLPKKKK IGFATFATGV VHGLQPDALM IVLPALALPS RLAGSAFLIM 180
181 FLVGTVIAMG SYTAFIGSCS EALKEKVPRI TEKLTWVSSL VAIGLGLGIV ISPFFGFSLY 240
241
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
