Protein Overview: EDL10_ARATH

General Information:
Name(s) found:	EDL10_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|75331788\|sp\|Q93Z80.1\|EDL10_ARATH RecName: Full=Sugar transporter ERD6-like 10 [NCBI NR] gi\|27363392\|gb\|AAO11615.1\| At3g05160/T12H1.12 [Arabidopsis thaliana] [NCBI NR] gi\|18397139\|ref\|NP_566247.1\| sugar transporter, putative [Arabidopsis thaliana] [NCBI NR] gi\|16604316\|gb\|AAL24164.1\| AT3g05160/T12H1_13 [Arabidopsis thaliana] [NCBI NR] Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1 [Swiss-Prot] At3g05160/T12H1.12 [Arabidopsis thaliana]gi\|16604316\|gb\|AAL24164.1\| AT3g05160/T12H1_13 [Arabidopsis thaliana]gi\|18397139\|ref\|NP_566247.1\| sugar transporter, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Sugar transporter [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| sugar transporter, putative \| chr3:1453273-1457003 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] AT3g05160/T12H1_13 [Arabidopsis thaliana] [nr-271106-contam.fasta] carbohydrate transporter/ sugar porter [Arabidopsis thaliana] [nr-271106-contam.fasta] At3g05160/T12H1.12 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| Major facilitator superfamily protein \| chr3:1453267-1456997 REVERSE LENGTH=458 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	458 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA][ISS] integral to membrane [IEA] endomembrane system [IEA]
Biological Process:	transmembrane transport [IEA] transport [IEA]
Molecular Function:	carbohydrate transmembrane transporter activity [ISS] sugar:hydrogen symporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEGLLRHEN DRDDRRITAC VILSTFVAVC SSFSYGCANG YTSGAETAIM KELDLSMAQF  60
   61 SAFGSFLNLG GAVGALFSGQ LAVILGRRRT LWACDLFCIF GWLSIAFAKN VLWLDLGRIS 120
  121 LGIGVGLTSY VVPVYIAEIT PKHVRGAFSA STLLLQNSGI SLIYFFGTVI NWRVLAVIGA 180
  181 LPCFIPVIGI YFIPESPRWL AKIGSVKEVE NSLHRLRGKD ADVSDEAAEI QVMTKMLEED 240
  241 SKSSFCDMFQ KKYRRTLVVG IGLMLIQQLS GASGITYYSN AIFRKAGFSE RLGSMIFGVF 300
  301 VIPKALVGLI LVDRWGRRPL LLASAVGMSI GSLLIGVSFT LQEMNLFPEF IPVFVFINIL 360
  361 VYFGFFAIGI GGLPWIIMSE IFPINIKVSA GSIVALTSWT TGWFVSYGFN FMFEWSAQGT 420
  421 FYIFAMVGGL SLLFIWMLVP ETKGQSLEEL QASLTGTT

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
alcohol transmembrane transporter activity	6.7545566917184	bayes_pls_golite062009
polyol transmembrane transporter activity	6.7545566917184	bayes_pls_golite062009
glycerol transmembrane transporter activity	6.54968363274124	bayes_pls_golite062009
glycerol-3-phosphate transmembrane transporter activity	5.40344495119017	bayes_pls_golite062009
transporter activity	4.09176719149278	bayes_pls_golite062009
substrate-specific transporter activity	3.59744164024479	bayes_pls_golite062009
transmembrane transporter activity	3.5865018981083	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	3.54194478414824	bayes_pls_golite062009
hexose phosphate transmembrane transporter activity	3.29248638217469	bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity	3.29248638217469	bayes_pls_golite062009
sugar:hydrogen symporter activity	2.99050613058546	bayes_pls_golite062009
cation:sugar symporter activity	2.99050613058546	bayes_pls_golite062009
carbohydrate transmembrane transporter activity	2.62141276633776	bayes_pls_golite062009
sugar transmembrane transporter activity	2.47557586092261	bayes_pls_golite062009
ion transmembrane transporter activity	2.21266150105753	bayes_pls_golite062009
solute:hydrogen symporter activity	2.10485633822652	bayes_pls_golite062009
binding	1.89539096965643	bayes_pls_golite062009
cation transmembrane transporter activity	1.79369588808394	bayes_pls_golite062009
monosaccharide transmembrane transporter activity	1.6904339767429	bayes_pls_golite062009
active transmembrane transporter activity	1.59419818573076	bayes_pls_golite062009
secondary active transmembrane transporter activity	1.22264637452409	bayes_pls_golite062009
symporter activity	0.74591237387473	bayes_pls_golite062009
solute:cation symporter activity	0.74591237387473	bayes_pls_golite062009
sugar binding	0.285073104957756	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..458]	PSI-BLAST	26.0	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

Protein Overview: EDL10_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: