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Protein Overview: gi|47940707

General Information:
Name(s) found: gi|47940707 [NCBI NR]
Description(s) found:
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  • gi|47940707|gb|AAH72495.1| Rab5a protein [Rattus norvegicus] [NCBI NR]
  • Unknown (protein for MGC:91680) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Hypothetical protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Rab5a protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 HYPOTHETICAL PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Rab5a Rab5a protein [rat-ipi-250309-contam.fasta]
  • Rab5a protein OS=Rattus norvegicus GN=Rab5a [011711_HMR.fasta]
  • Rab5a protein OS=Rattus norvegicus GN=Rab5a PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Protein Rab5a OS=Rattus norvegicus GN=Rab5a PE=2 SV=1 [Aridor_1205.fasta]
  • Isoform of M0RC99, Rab5a protein OS=Rattus norvegicus GN=Rab5a PE=2 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 61 amino acids

    Gene Ontology:
    Cellular Component: synaptosome [IDA][NAS]
    synaptic vesicle [IDA]
    neuronal cell body [IDA]
    protein complex [IDA]
    plasma membrane [UNKNOWN][IDA]
    zymogen granule membrane [IDA]
    endocytic vesicle [UNKNOWN][IEA]
    dendrite [IDA]
    early endosome [UNKNOWN][IDA]
    endosome [UNKNOWN]
    perinuclear region of cytoplasm [IDA]
    cytoplasm [IDA]
    membrane raft [UNKNOWN][IEA]
    ruffle [UNKNOWN][IEA]
    axon [IDA]
    Biological Process: vesicle-mediated transport [NAS]
    small GTPase mediated signal transduction [IEA]
    regulation of long-term neuronal synaptic plasticity [IMP]
    protein transport [IEA]
    endocytosis [UNKNOWN][IMP]
    Molecular Function: nucleotide binding [IEA]
    GTP binding [UNKNOWN][IEA]
    protein binding [UNKNOWN]
    GTPase activity [UNKNOWN][IEA]
    guanyl nucleotide binding [UNKNOWN][IEA]
    GDP-dissociation inhibitor binding [IDA]
    GDP binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRGATRPN GPNTGNKICQ FKLVLLGESA VGKSSLVLRF VKGQFHEFQE STIGGSTVLC  60
   61 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle