YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TIG_ARATH

General Information:
Name(s) found: TIG_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Trigger factor-like protein TIG, Chloroplastic OS=Arabidopsis thaliana GN=TIG PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: protein transport [IEA]
    protein folding [IEA][ISS]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELCVISTTT TVKAINPFLP SITRRVSSRL FQSDSVLQFG GRLKKPISRP LDMSCVSRKI  60
   61 GFFGDFMSHG GNFRLFAAAS PAVETSVKED KLPADLKVTE TVQANSSVKL SVEVPEIVCE 120
  121 DCYQRVLTEF MKLSKVPGFR PKTRVPENII VGFVGRQYVL RATVESILKR TLPHAMESVT 180
  181 GRALKDSIQI VSSFPDMEKA YSKLKTLSYE VVVDVVPELK WNPEDGYKNM KVVVELGDEI 240
  241 DAKKACERQL RQKYKSLGAL KIVTERGLQV GDLAVVDISA TTIDEDGSTG QAIPDAESKG 300
  301 FHFDTEEGNR LLPGFLDAII GIRAGESKSF TLVFPESWKQ ESLRGQRAQF TVDCKELFYR 360
  361 DLPTLDDSLA DKLLPGCTTL KEVEETLAKR CQEMEQEAKE QATDNAILEQ IRKMVEVEIP 420
  421 QSLFEEQGRQ FYGARLLEIQ GNMKLNEDQL ASLSSQKAVN EFLETQRESI TNIIKQNIAV 480
  481 GDIFKRENLE FSTDELVKEV ENSISEFKKH KQEFDEERVK DQVQEILEGA KVLEWLKDRA 540
  541 EIQYITR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..547] PSI-BLAST 86.522879 Trigger Factor in Complex with the Ribosome forms a Molecular Cradle for Nascent Proteins

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidyl-prolyl cis-trans isomerase activity
    		•  4.4182664267098 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  4.33661522951196 bayes_pls_golite062009
  • isomerase activity
    		•  2.83057106437196 bayes_pls_golite062009
  • macrolide binding
    		•  1.34183721806994 bayes_pls_golite062009
  • catalytic activity
    		•  1.25572252987503 bayes_pls_golite062009
  • FK506 binding
    		•  1.11705415888427 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle