Protein Overview: VSP55_ARATH

General Information:
Name(s) found:	VSP55_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|75167725\|sp\|Q9AST6.1\|VSP55_ARATH RecName: Full=Vacuolar protein sorting-associated protein 55 homolog [NCBI NR] gi\|51972031\|dbj\|BAD44680.1\| unknown protein [Arabidopsis thaliana] [NCBI NR] gi\|30692698\|ref\|NP_849741.1\| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] [NCBI NR] gi\|18398420\|ref\|NP_564400.1\| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] [NCBI NR] gi\|17978901\|gb\|AAL47420.1\| At1g32410/F5D14_6 [Arabidopsis thaliana] [NCBI NR] gi\|145324112\|ref\|NP_001077645.1\| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] [NCBI NR] gi\|145324110\|ref\|NP_001077644.1\| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] [NCBI NR] gi\|145324108\|ref\|NP_001077643.1\| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] [NCBI NR] gi\|13605734\|gb\|AAK32860.1\|AF361848_1 At1g32410/F5D14_6 [Arabidopsis thaliana] [NCBI NR] gi\|110741330\|dbj\|BAF02215.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana GN=At1g32410 PE=2 SV=1 [Swiss-Prot] At1g32410/F5D14_6 [Arabidopsis thaliana]gi\|17978901\|gb\|AAL47420.1\| At1g32410/F5D14_6 [Arabidopsis thaliana]gi\|51972031\|dbj\|BAD44680.1\| unknown protein [Arabidopsis thaliana]gi\|30692698\|ref\|NP_849741.1\| vacuolar protein sorting 55 family protein / VPS55 [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Vacuolar protein sorting 55 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| vacuolar protein sorting 55 family protein / VPS55 family protein \| chr1:11694378-11695277 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta] At1g32410/F5D14_6 [Arabidopsis thaliana] [nr-271106-contam.fasta] transporter [Arabidopsis thaliana] [nr-271106-contam.fasta] unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| Vacuolar protein sorting 55 (VPS55) family protein \| chr1:11694398-11695297 FORWARD LENGTH=140 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	140 amino acids
Gene Ontology:
Cellular Component:	vacuole [IDA]
Biological Process:	transport [ISS]
Molecular Function:	transporter activity [ISS]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MADVPGYLRT CLDMGKIAFL AILVSTGIVL QILACALFNN WWPMLSVIMY VLLPMPLLFF 60 61 GGSDSTSLFN ESDNSWINAA KFLTGASAVG SVAIPSILKH AGLIGWGALA LDLSSYVVFL 120 121 VAILGYICIG DASDNYYSYI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..140]	Pfam	56.21467	No description for PF04133.5 was found. No confident structure predictions are available.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle