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Protein Overview: RPD1_ARATH

General Information:
Name(s) found: RPD1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: negative regulation of cell proliferation [IMP]
    lateral root morphogenesis [IMP]
    Molecular Function: ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLRNAFK TLNPKRKLAT TILPSINLIL VKPFSQSTTI PKKQDRVRDH GYDNYMEVEK  60
   61 KIRKVVKFHS LILSQPNHTI AISLLDTLAR RLGLGFKQHE PGAFLLKFPH VFEIYEHPVQ 120
  121 RILYCRLTRK ALDQIRHEHE AVLDQIPDAV TRLRKLVMMS NTGRIRLEHV RIARTEFGLP 180
  181 EDFEYSVILK HPQFFRLIDG EETRDKYIEI VEKDPNLSIC AIERVREIEY RTKGIDAEDV 240
  241 RFSFVVNFPP GFKIGKYFRI AVWKWQRLPY WSPYEDISGY DLRSMEAQNR LEKRSVACIH 300
  301 ELLSLTVEKK ITLERIAHFR NVMNLPKKLK EFLLQHQGIF YISTRGNYGK LHTVFLREGY 360
  361 KRGELVEPND VYLARRRLAE LVLMSPRKAK VDAELVRYRD GLDDEDDVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] deduced N/A No confident structure predictions are available.
    2 View Details [162..311] deduced N/A No confident structure predictions are available.
    3 View Details [312..409] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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