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Protein Overview: 6PGL5_ARATH

General Information:
Name(s) found: 6PGL5_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75243464|sp|Q84WW2.1|6PGL5_ARATH RecName: Full=Probable 6-phosphogluconolactonase 5, chloroplastic; Short=6PGL 5; AltName: Full=Protein EMBRYO DEFECTIVE 2024; Flags: Precursor [NCBI NR]
  • gi|25054866|gb|AAN71922.1| putative 6-phosphogluconolactonase [Arabidopsis thaliana] [NCBI NR]
  • gi|18420789|ref|NP_568445.1| emb2024 (embryo defective 2024); 6-phosphogluconolactonase/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1 [Swiss-Prot]
  • putative 6-phosphogluconolactonase [Arabidopsis thaliana]gi|18420789|ref|NP_568445.1| glucosamine/galactosamine-6-phosphate isomerase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glucosamine/galactosamine-6-phosphate isomerase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EMB2024 | EMB2024 (EMBRYO DEFECTIVE 2024); catalytic | chr5:8330535-8331787 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • EMB2024; 6-phosphogluconolactonase/ catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 6-phosphogluconolactonase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EMB2024, PGL3 | NagB/RpiA/CoA transferase-like superfamily protein | chr5:8330532-8331784 REVERSE LENGTH=325 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    peroxisome [IDA]
    chloroplast [IDA]
    Biological Process: carbohydrate metabolic process [ISS]
    cellular response to redox state [IMP]
    embryonic development ending in seed dormancy [NAS]
    defense response to oomycetes [IMP]
    defense response to bacterium [IMP]
    Molecular Function: catalytic activity [ISS]
    6-phosphogluconolactonase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSCFLRS ILFSSPTNLR SNHHLPTFFP KNYLICSHST SSRFESLSVS SIGTGSTKKS  60
   61 SDTRRKVKSM ATTNIGKEEK KRVEIYDLEE NLVIDLAKFT ADLSDKFCKE RGAFTVVVSG 120
  121 GSLIKSLRKL VESPYVDSID WARWHFFWVD ERVVPKNHDD SNYKLAYDSF LSKVPIPPGN 180
  181 VYAINEALSA EAAADDYETC LKHLVNTNIL RVSESTGFPK FDLMLLGMGP DGHVASLFPG 240
  241 HGLCNESKKW VVSISDSPKP PSERITFTFP VINSSAHVAL VVCGSGKAEA VEAALKKTGN 300
  301 VPPAGSVSAE DELVWFLDKP ASSKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 54.0 Crystal Structure of devB protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle