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Protein Overview: gi|190405268

General Information:
Name(s) found: gi|190405268 [NCBI NR]
Description(s) found:
  • gi|190405268|gb|EDV08535.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCRNTARTG CKFFRLYHSN PIEHVKPIHI KPLTYGKESP QYKVLSLALQ KFVPEHGFSE  60
   61 RSIVESLNEL GYPSSMISSI GAPNSPSFFH SSTAVMELIK FQLVDKRYRL TEGINPDVTP 120
  121 QYKLPSLEHL LLKRLEMDKP IGGHLSELMS QLAIPSAFLF ETAIPELHRL SDDMIYFSNE 180
  181 KDHHDSAWYA KRLAVSSTYI GSKLFMAQDK SHNYKETFTF AKDKLHRVMR LGEYYNNTEE 240
  241 FAWYTLMSTV NLIKSQLVRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106]
    [141..161]    		 ORFEUS 12.85 Multidrug binding protein QacR
    2 View Details [107..140]
    [162..260]    		 ORFEUS 12.85 Multidrug binding protein QacR

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.167503712607 bayes_pls_golite062009
  • DNA binding
    		•  1.95239572065848 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.91459297185958 bayes_pls_golite062009
  • transcription factor activity
    		•  1.52599344168604 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.453985309086988 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.291481908925617 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle