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Protein Overview: gi|220952208

General Information:
Name(s) found: gi|220952208 [NCBI NR]
Description(s) found:
  • gi|220952208|gb|ACL88647.1| Su(var)2-10-PE [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 533 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFPSLQECE QMVQMLRVVE LQKILSFLNI SFAGRKTDLQ SRILSFLRTN LELLAPKVQE  60
   61 VYAQSVQEQN ATLQYIDPTR MYSHIQLPPT VQPNPVGLVG SGQGVQVPGG QMNVVGGAPF 120
  121 LHTHSINSQL PIHPDVRLKK LAFYDVLGTL IKPSTLVPRN TQRVQEVPFY FTLTPQQATE 180
  181 IASNRDIRNS SKVEHAIQVQ LRFCLVETSC DQEDCFPPNV NVKVNNKLCQ LPNVIPTNRP 240
  241 NVEPKRPPRP VNVTSNVKLS PTVTNTITVQ WCPDYTRSYC LAVYLVKKLT STQLLQRMKT 300
  301 KGVKPADYTR GLIKEKLTED ADCEIATTML KVSLNCPLGK MKMLLPCRAS TCSHLQCFDA 360
  361 SLYLQMNERK PTWNCPVCDK PAIYDNLVID GYFQEVLGSS LLKSDDTEIQ LHQDGSWSTP 420
  421 GLRSETQILD TPSKPAQKVE VISDDIELIS DDAKPVKRDL SPAQDEQPTS TSNSETVDLT 480
  481 LSDSDDDMPL AKRRPPAKQA VASSTSNGSG GGQRAYTPAQ QPQQSGTLDP FLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 15.69897 Solution structure of human p53 binding domain of PIAS-1
    2 View Details [133..190] deduced N/A No confident structure predictions are available.
    3 View Details [191..317] MSA 2.131984 View MSA. No confident structure predictions are available.
    4 View Details [318..463] PSI-BLAST 10.69897 No description for 2yu4A was found.
    5 View Details [464..533] MSA 1.095995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SUMO ligase activity
    		•  7.09211721404578 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  5.19208367271658 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  4.23914967265256 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.41663142583782 bayes_pls_golite062009
  • DNA binding
    		•  3.10342439340038 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.06883460395012 bayes_pls_golite062009
  • binding
    		•  2.85946414867169 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.74753557795928 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.29668422758615 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  2.24838171947021 bayes_pls_golite062009
  • transcription corepressor activity
    		•  2.19580341360526 bayes_pls_golite062009
  • transcription coactivator activity
    		•  2.00568376574074 bayes_pls_golite062009
  • transcription factor binding
    		•  1.87393007510949 bayes_pls_golite062009
  • transcription cofactor activity
    		•  1.74991817705903 bayes_pls_golite062009
  • steroid hormone receptor binding
    		•  1.6614513749396 bayes_pls_golite062009
  • hormone receptor binding
    		•  1.54663504907102 bayes_pls_golite062009
  • protein binding
    		•  1.4634286530239 bayes_pls_golite062009
  • androgen receptor binding
    		•  1.42204964058772 bayes_pls_golite062009
  • transcription activator activity
    		•  1.33699031660219 bayes_pls_golite062009
  • nuclear hormone receptor binding
    		•  1.31532203831033 bayes_pls_golite062009
  • chromatin binding
    		•  0.65047159761755 bayes_pls_golite062009
  • receptor binding
    		•  0.52768617849698 bayes_pls_golite062009
  • catalytic activity
    		•  0.454272578060498 bayes_pls_golite062009
  • ligase activity
    		•  0.36302660895622 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle