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Protein Overview: gi|220950614, gi...

General Information:
Name(s) found: gi|220959330 [NCBI NR]
gi|220950614 [NCBI NR]
Description(s) found:
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  • gi|220959330|gb|ACL92208.1| Nmda1-PC [synthetic construct] [NCBI NR]
  • gi|220950614|gb|ACL87850.1| Nmda1-PC [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 324 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWQSVPQYP QYQDPNQQYN YGGGNPPQGG YGGYPPQGGY PPQGPPQGYP PYAQGGAQPY  60
   61 PQPYGQGPPP GGYAPQPGFI QPPPSAGGYG AYDDPESQPK NFSFDDQSIR RGFIRKVYLI 120
  121 LMGQLIVTFG AVALFVYHEG TKTFARNNMW LFWVALGVML VTMLSMACCE SVRRQTPTNF 180
  181 IFLGLFTAAQ SFLMGVSATK YAPKEVLMAV GITAAVCLAL TIFALQTKYD FTMMGGILIA 240
  241 CMVVFLIFGI VAIFVKGKII TLVYASIGAL LFSVYLIYDT QLMMGGEHKY SISPEEYIFA 300
  301 ALNLYLDIIN IFMYILTIIG ASRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] MSA 59.313997 View MSA. No confident structure predictions are available.
    2 View Details [135..324] FFAS03 1.07 Anabaena sensory rhodopsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • receptor activity
    		•  5.02577574778994 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  4.78146266698118 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  4.50732599816163 bayes_pls_golite062009
  • signal transducer activity
    		•  4.06754387760954 bayes_pls_golite062009
  • molecular transducer activity
    		•  4.06754387760954 bayes_pls_golite062009
  • photoreceptor activity
    		•  2.255650071924 bayes_pls_golite062009
  • peptide receptor activity, G-protein coupled
    		•  2.24641021606542 bayes_pls_golite062009
  • peptide receptor activity
    		•  2.19154385339624 bayes_pls_golite062009
  • G-protein coupled photoreceptor activity
    		•  2.18283583899056 bayes_pls_golite062009
  • peptide binding
    		•  2.13067531676633 bayes_pls_golite062009
  • neurotransmitter receptor activity
    		•  2.01689979100071 bayes_pls_golite062009
  • neurotransmitter binding
    		•  1.93267309344853 bayes_pls_golite062009
  • binding
    		•  1.73271497611234 bayes_pls_golite062009
  • adrenoceptor activity
    		•  1.2968322466925 bayes_pls_golite062009
  • amine binding
    		•  0.990396049262525 bayes_pls_golite062009
  • neuropeptide receptor activity
    		•  0.968922552138296 bayes_pls_golite062009
  • neuropeptide binding
    		•  0.968922552138296 bayes_pls_golite062009
  • hydrolase activity
    		•  0.728551374396809 bayes_pls_golite062009
  • protein binding
    		•  0.260551388866474 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle