YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|195566518, gi...

General Information:
Name(s) found: gi|195566518 [NCBI NR]
gi|194204219 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|195566518|ref|XP_002106827.1| GD15903 [Drosophila simulans] [NCBI NR]
  • gi|194204219|gb|EDX17795.1| GD15903 [Drosophila simulans] [NCBI NR]
    • Organism: Drosophila simulans
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRFAPGQA PVQSRYQPPP PAPGMRPYPP PGASFPPRGF PLHPNTTQPV PGTANVAGVP  60
   61 GVPGVPGVPG PSLLQRAAQQ PGFQSSLRGT GAGGGGVGSG GGSKRSNESR SLGGGGSKSD 120
  121 FATAKKKKKL AEKILPQKVR DLVPESQAYM DLLTFERKLD ATIMRKRLDI QEALKRPMKQ 180
  181 KRKLRIFISN TFYPSKEPTN DGEEGAVASW ELRVEGRLLE DGKGDPNTKI KRKFSSFFKS 240
  241 LVIELDKELY GPDNHLVEWH RTHTTQETDG FQVKRPGDRN VRCTILLLLD YQPLQFKLDP 300
  301 RLARLLGVHT QTRPVIISAL WQYIKTHKLQ DAHEREYINC DKYLEQIFSC QRMKFAEIPQ 360
  361 RLNPLLHPPD PIVINHFIES GAENKQTACY DIDVEVDDTL KNQMNSFLMS TASQQEIQGL 420
  421 DTKIHETVDT INQMKTNREF FLSFAKDPQM FIHRWIISET RDLKLMTDVA GNPEEERRAE 480
  481 FYYQPWTHEA VSRYFFTKVN QKRAELEQAL GIRNG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 23.39794 No description for 1y0fB was found.
    2 View Details [145..232] deduced N/A No confident structure predictions are available.
    3 View Details [233..399] PSI-BLAST 30.69897 Solution structure of the SWIB domain of mouse BRG1-associated factor 60a
    4 View Details [400..515] MSA 1.058952 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  4.01592136607858 bayes_pls_golite062009
  • basal transcription repressor activity
    		•  3.31155980072144 bayes_pls_golite062009
  • transcription activator activity
    		•  3.16006262739093 bayes_pls_golite062009
  • binding
    		•  2.67987108623459 bayes_pls_golite062009
  • protein binding
    		•  2.63183933218658 bayes_pls_golite062009
  • transcription coactivator activity
    		•  2.58234407051051 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  2.32480271621458 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.98538788872171 bayes_pls_golite062009
  • transcription factor binding
    		•  1.73032563380905 bayes_pls_golite062009
  • transcription cofactor activity
    		•  1.60414428986898 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.06026105710513 bayes_pls_golite062009
  • structural molecule activity
    		•  0.66106995897056 bayes_pls_golite062009
  • p53 binding
    		•  0.19984769109713 bayes_pls_golite062009
  • catalytic activity
    		•  0.121624777548864 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle