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Protein Overview: gi|18410417, gi|...

General Information:
Name(s) found: gi|18410417 [NCBI NR]
gi|15982755 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|18410417|ref|NP_567032.1| glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15982755|gb|AAL09718.1| AT3g56060/F18O21_20 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 577 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: alcohol metabolic process [IEA]
    Molecular Function: aldehyde-lyase activity [ISS]
    oxidoreductase activity, acting on CH-OH group of donors [IEA]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFHIFRFFQ FILVAVFIFH DSCYSDEAGN YRFMKDATLA PKLSHFDYII IGGGTAGCAL  60
   61 AATLSQNATV LVLERGGSPY DDPAATDIGN FANTLLNITP NSWSQLFISE DGVFNSRARV 120
  121 LGGGTVINAG FYSRAEEDFV AEAGWERDEV EAAYEWVEKK VVFEPPVNKW QSAFRDGLLE 180
  181 AGVTPYNGFT YEHIVGTKFG GTIFDRDGHR HTAANLLEYA NPNMIVVYLH ASVHKILFTI 240
  241 KGNQRPKAYG VIFLDANGVS YKAELATQDS TMSEVILSAG AIASPQLLML SGVGPAAHLA 300
  301 AYRVNPVIVD QPMVGQGMGD NPMNPVFIPS PEPVEVSLVQ AVGITKFGSY IEGGSALSLS 360
  361 ISLTRSFFDG VLNLLKKTKL PTQSISKFFK SLDLTLNVTT KAGVIIQKVN GPLSRGHLEL 420
  421 RNTNPDDNPS VTFNYFKDPE DLNKCVEGLS TIIKVIDSKG YSKYKYPLAS ARGLLNLILA 480
  481 LPTNLRPRHI TSTFDLEQYC IDTVMTIYHY HGGCQVGKVV DNNYKVLGVD ALRIIDGSTF 540
  541 LKSPGTNPQA TIMMLGRYMG QKILRERMAF RGKEEET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..577] PSI-BLAST 86.221849 Hydroxynitrile lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • choline dehydrogenase activity
    		•  3.62512611191423 bayes_pls_golite062009
  • catalytic activity
    		•  1.40171956669527 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.20026260184261 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.64018644518404 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle