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Protein Overview: gi|165939105, gi...

General Information:
Name(s) found: gi|165939105 [NCBI NR]
gi|165912878 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|165939105|ref|ZP_02227656.1| 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
  • gi|165912878|gb|EDR31504.1| 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Yersinia pestis biovar Orientalis str. IP275] [NCBI NR]
    • Organism: Yersinia pestis biovar Orientalis str. IP275
    Length: 758 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILNHTLGF PRVGLKRELK KAQESYWAGN STQEELLNVG RELRARHWQQ QQQAGVDLVP  60
   61 VGDFAWYDHV LTTSLLLGNV PERHQNADGS IDIDTLFRIG RGRAPTGKPA AAAEMTKWFN 120
  121 TNYHYMVPEF QQGQQFKLGW TQLLDEVDEA LALGHKIKPV LLGPITYLWL GKVKGEQFDR 180
  181 LSLLNDILPV YQQVLAELAK RGIEWVQIDE PALVLELPQE WLDAYQPAYQ ALQGQVKLLL 240
  241 TTYFDSIGHN IDTIRALPVQ GLHVDVVTGH DDLAVLNKNL PKEWLLSLGV INGRNVWRAD 300
  301 LSSWFERLQP LVNSRPLWLG SSCSLLHSPI DLNEETRLDA EVKSWFAFAL QKCAELALLT 360
  361 QALNAPNDAK LAELAAYSAP IRARRSSSRV HNAQVEQRLA AITSQDIERQ LPYEARAETQ 420
  421 RKRFNLPAWP TTTIGSFPQT TEIRGLRLDF KQGRLDGKNY RTGISEHIKH AIAEQERLGL 480
  481 DVLVHGEAER NDMVEYFGEH LDGFVFTQNG WVQSYGSRCV KPPVIIGDIS RPEAITVEWA 540
  541 KYAQSLTEKP VKGMLTGPVT ILCWSFPRED VSRETIAKQI ALALRDEVED LEKAGIGIIQ 600
  601 IDEPALREGL PLRRADWQAY LQWAVDAFKL NAAVAQNDTQ IHTHMCYCEF NDIMDSIAAL 660
  661 DADVITIETS RSDMELLESF EDFAYPNEIG PGVYDIHSPN VPSVEWIEAL LRKAAQRIPA 720
  721 ERLWVNPDCG LKTRGWPETR QALANMVLAA QRLREEQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..758] PSI-BLAST 1000.0 A. thaliana cobalamine independent methionine synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
    		•  6.40786073037099 bayes_pls_golite062009
  • 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
    		•  6.40786073037099 bayes_pls_golite062009
  • uroporphyrinogen decarboxylase activity
    		•  3.13638443707338 bayes_pls_golite062009
  • S-methyltransferase activity
    		•  3.0142199413027 bayes_pls_golite062009
  • catalytic activity
    		•  2.37862248560593 bayes_pls_golite062009
  • binding
    		•  1.590130518929 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.54242506764415 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.52150758949987 bayes_pls_golite062009
  • lyase activity
    		•  0.825209465219608 bayes_pls_golite062009
  • protein binding
    		•  0.21865699924356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle