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Protein Overview: gi|193246597

General Information:
Name(s) found: gi|193246597 [NCBI NR]
Description(s) found:
  • gi|193246597|gb|ACF17166.1| URA3 [Yeast selection vector pIS418] [NCBI NR]
    • Organism: Yeast selection vector pIS418
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKATYKERA ATHPSPVAAK LFNIMHEKQT NLCASLDVRT TKELLELVEA LGPKICLLKT  60
   61 HVDILTDFSM EGTVKPLKAL SAKYNFLLFE DRKFADIGNT VKLQYSAGVY RIAEWADITN 120
  121 AHGVVGPGIV SGLKQAAEEV TKEPRGLLML AELSCKGSLA TGEYTKGTVD IAKSDKDFVI 180
  181 GFIAQRDMGG RDEGYDWLIM TPGVGLDDKG DALGQQYRTV DDVVSTGSDI IIVGRGLFAK 240
  241 GRDAKVEGER YRKAGWEAYL RRCGQQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] PSI-BLAST 1607.522879 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • orotidine-5'-phosphate decarboxylase activity
    		•  2.87717797280068 bayes_pls_golite062009
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • binding
    		•  1.26628194990205 bayes_pls_golite062009
  • ribulose-phosphate 3-epimerase activity
    		•  0.982517927791965 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.83446736141993 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
    		•  0.700596444201789 bayes_pls_golite062009
  • phosphoribosylanthranilate isomerase activity
    		•  0.644387926981014 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  0.580372404365274 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.54291459543716 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.108467338662618 bayes_pls_golite062009
  • protein binding
    		•  0.014429239696785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle