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Protein Overview: gi|190408470

General Information:
Name(s) found: gi|190408470 [NCBI NR]
Description(s) found:
  • gi|190408470|gb|EDV11735.1| zinc/cadmium resistance protein [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 442 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITGKELRII SLLTLDTVFF LLEITIGYMS HSLALIADSF HMLNDIISLL VALWAVDVAK  60
   61 NRGPDAKYTY GWKRAEILGA LINAVFLIAL CFSIMIEALQ RLIEPQEIQN PRLVLYVGVA 120
  121 GLISNVVGLF LFHDHGSDSL HSHSHGSVES GNNDLDIESN ATHSHSHASL PNDNLAIDED 180
  181 AISSPGPSGQ IGEVLPQSVV NRLSNESQPL LNHDDHDHSH ESKKPGHRSL NMHGVFLHVL 240
  241 GDALGNIGVI AAALFIWKTE YSWRYYSDPI VSLIITIIIF SSALPLSRRA SRILLQATPS 300
  301 TISADQIQRE ILAVPGVIAV HDFHVWNLTE SIYIASIHVQ IDCAPDKFMS SAKLIRKIFH 360
  361 QHGIHSATVQ PEFVSGDVNE DIRRRFSIIA GGSPSSSQEA FDSHGNTEHG RKKRSPTAYG 420
  421 ATTASSNCIV DDAVNCNTSN CL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..442] Pfam 69.259637 Cation efflux family No confident structure predictions are available.
    2 View Details [72..442] PSI-BLAST 47.522879 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.60087208506814 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.49419690808578 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  6.066906606566 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.19993137135137 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  3.5658659940326 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.68106285271045 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.32644140472297 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.19343183150052 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  2.11491587250012 bayes_pls_golite062009
  • cation channel activity
    		•  1.89531256510168 bayes_pls_golite062009
  • ion channel activity
    		•  1.33777369753101 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.31663166812163 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.28221434614717 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.27960450391272 bayes_pls_golite062009
  • channel activity
    		•  1.27960450391272 bayes_pls_golite062009
  • binding
    		•  1.27456652114636 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.376948884172728 bayes_pls_golite062009
  • protein binding
    		•  0.311357063667067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle