Protein Overview: gi|190406822

General Information:
Name(s) found:	gi\|190406822 [NCBI NR]
Description(s) found:	gi\|190406822\|gb\|EDV10089.1\| eukaryotic initiation factor 4F subunit p150 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
Organism:	Saccharomyces cerevisiae RM11-1a
Length:	952 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDETAHPTQ SASKQESAAL KQTGDDQQES QQQRGYTNYN NGSNYTQKKP YNSNRPHQQR  60
   61 GGKFGPNRYN NRGNYNGGGS FRGGHMGANS SNVPWTGYYN NYPVYYQPQQ MAAAGSAPAN 120
  121 PIPVEEKSPV PTKIEITTKS GEHLDLKEQH KAKLQSQERS TVSPQPESKL KETSDSTSTS 180
  181 TPTPTPSTND SKASSEENIS EAEKTRRNFI EQVKLRKAAL EKKRKEQLEG SSGNNNIPMK 240
  241 TTPENVEEKG SDKPEVTEKT KPAEEKSAEP EVKQETPAEE GEQGEKGQIK EESTPKVLTF 300
  301 AERLKLKKQQ KEREEKTEGK ENKEVPVQEE TKSAIESAPV PPSEQVKEET EVAETEQSNI 360
  361 DESATTPAIP TKSDEAEAEV EAEAGDAGTK IGLEAEIETT TDETDDGTNT VSHILNVLKD 420
  421 ATPIEDVFSF NYPEGIEGPD IKYKKEHVKY TYGPTFLLQF KDKLNVKADA EWVQSTASKI 480
  481 VIPPGMGRGN RSRDSGRFGN NSSRGHDFRN TSVRNMDDRA NSRTSSKRRS KRMNDDRRSN 540
  541 RSYTSRRDRE RGSYRNEEKR EDDKPKEEVA PLVPSANRWV PKFKSKKTEK KLAPDGKTEL 600
  601 LDKDEVERKM KSLLNKLTLE MFDAISSEIL AIANISVWET NGETLKAVIE QIFLKACDEP 660
  661 HWSSMYAQLC GKVVKELNPD ITDETNEGKT GPKLVLHYLV ARCHAEFDKG WTDKLPTNED 720
  721 GTPLEPEMMS EEYYAAASAK RRGLGLVRFI GFLYRLNLLT GKMMFECFRR LMKDLTDSPS 780
  781 EETLESVVEL LNTVGEQFET DSFRTGQATL EGSQLLDSLF GILDNIIQTA KISSRIKFKL 840
  841 IDIKELRHDK NWNSDKKDNG PKTIQQIHEE EERQRQLKNN SRSNSRRTNN SSNRHSFRRD 900
  901 APPASKDSFI TTRTYSQRNS QRAPPPKEEP AAPTSTATNM FSALMGESDD EE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..82]	ORFEUS	12.14	No description for 1l8mA was found.
2	View Details	[83..402]	ORFEUS	10.91	Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
3	View Details	[403..505]	ORFEUS	10.91	Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains
4	View Details	[506..591]	deduced	N/A	No confident structure predictions are available.
5	View Details	[592..731]	PSI-BLAST	310.165202	Eukaryotic initiation factor eIF4G
6	View Details	[732..890]	PSI-BLAST	310.165202	Eukaryotic initiation factor eIF4G
7	View Details	[891..952]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

No functions predicted.

3

Term	Confidence	Notes
translation initiation factor activity	10.603094323259	bayes_pls_golite062009
translation factor activity, nucleic acid binding	6.05435928492991	bayes_pls_golite062009
translation regulator activity	6.02151774494908	bayes_pls_golite062009
binding	1.66056773797288	bayes_pls_golite062009
nucleic acid binding	1.33292024661028	bayes_pls_golite062009

4

No functions predicted.

5

Term	Confidence	Notes
translation initiation factor activity	9.72578576774139	bayes_pls_golite062009
RNA cap binding	6.12623630895688	bayes_pls_golite062009
translation factor activity, nucleic acid binding	5.51508149717622	bayes_pls_golite062009
translation regulator activity	5.47755138510933	bayes_pls_golite062009
structural molecule activity	4.37969512292045	bayes_pls_golite062009
binding	2.48958374349477	bayes_pls_golite062009
RNA binding	1.98024495780436	bayes_pls_golite062009
protein binding	1.94427330399472	bayes_pls_golite062009
nucleic acid binding	1.14394632253646	bayes_pls_golite062009
signal sequence binding	0.289133192719901	bayes_pls_golite062009
cytoskeletal protein binding	0.232758919136574	bayes_pls_golite062009
transcription regulator activity	0.223441052840823	bayes_pls_golite062009
DNA binding	0.206335065849379	bayes_pls_golite062009
mRNA binding	0.12130984199507	bayes_pls_golite062009

6

No functions predicted.

7

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle