YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|190405032

General Information:
Name(s) found: gi|190405032 [NCBI NR]
Description(s) found:
  • gi|190405032|gb|EDV08299.1| hypothetical protein SCRG_00519 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSDTNGRTK SNNSPSDNNP NETVILIDSD KEEDASIREA NLPVRLYPDR RVGRRRDALN  60
   61 RFVRSDSRSR NSQRTHITAS SERPDFQANN DDITIIREVG RFFGDDGPID PSAHYVDLDQ 120
  121 EPGSETLETP RTIQVDNTNG YLNDNGNNNE SDDGLTIVEE RTTRPRVTLN LPGGERLEVT 180
  181 ATTTDIPIRR SFEFQEDLGA SRRQLLRRSA TRARNLFVDR SDENDEDWTD DTHNLPEAIQ 240
  241 RARRESRMRM SRRIAERQRR VQQQRVSSDE NISTSIRLQS IRERIQSYTP DIRSAFHRAE 300
  301 SLHEFRSILQ NVAPITLQEC EEELMALFTE FRNQLLQNWA IDRVRNTQEE ALRLHREALE 360
  361 RQERTAGRVF HRGTLRESIT NYLNFNGEDG FLSRLWSGPA LSDADEERHT QNIIDMIQER 420
  421 EERERDVVMK NLMNKTRAQQ EEFEARAASL PEGYSASFDT TPKMKLDITK NGKEETIIVT 480
  481 DDDLAKTLED IPVCCLCGAE LGVGIPDDFT GISQKDRGVS FEGLVSKYKF HCPYQTLARP 540
  541 SMLDRDLSKR TFIASCGHAF CGRCFARIDN AKKKSKMPKK KLAQLKGSAH PDNYGPKLCP 600
  601 ADSCKKLIRS RGRLKEVYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..619] deduced N/A No confident structure predictions are available.
    2 View Details [129..224] deduced N/A No confident structure predictions are available.
    3 View Details [225..400] deduced N/A No confident structure predictions are available.
    4 View Details [401..619] FFAS03 1.21 Effector domain of rabphilin-3a

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • small conjugating protein ligase activity
    		•  6.54419701634876 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  5.81081610285635 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  4.98431511196461 bayes_pls_golite062009
  • binding
    		•  2.64299129598715 bayes_pls_golite062009
  • histone binding
    		•  2.18177552065219 bayes_pls_golite062009
  • ligase activity
    		•  1.77976870053311 bayes_pls_golite062009
  • protein binding
    		•  1.22943142958169 bayes_pls_golite062009
  • DNA binding
    		•  1.19418339248022 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.16305426959673 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.03976333752272 bayes_pls_golite062009
  • chromatin binding
    		•  0.880691867408093 bayes_pls_golite062009
  • methylated histone residue binding
    		•  0.635303636820801 bayes_pls_golite062009
  • protein kinase activity
    		•  0.408714103048697 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.152196493675947 bayes_pls_golite062009
  • transcription factor activity
    		•  0.124593950007804 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  0.108887977080526 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  0.108887977080526 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0912529186589195 bayes_pls_golite062009
  • kinase activity
    		•  0.00873885939655655 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle