YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|48425221, gi|...

General Information:
Name(s) found: gi|48425221 [NCBI NR]
gi|48425220 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|48425221|pdb|1PT6|B Chain B, I Domain From Human Integrin Alpha1-Beta1 [NCBI NR]
  • gi|48425220|pdb|1PT6|A Chain A, I Domain From Human Integrin Alpha1-Beta1 [NCBI NR]
    • Organism: Homo sapiens
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSECSTQLDI VIVLDGSNSI YPWDSVTAFL NDLLKRMDIG PKQTQVGIVQ YGENVTHEFN  60
   61 LNKYSSTEEV LVAAKKIVQR GGRQTMTALG TDTARKEAFT EARGARRGVK KVMVIVTDGE 120
  121 SHDNHRLKKV IQDCEDENIQ RFSIAILGSY NRGNLSTEKF VEEIKSIASE PTEKHFFNVS 180
  181 DELALVTIVK TLGERIFALE ATAVDSSGRI VTD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|219109210, gi... gi|48425221, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 50.69897 I domain from human integrin alpha1-beta1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0650247416983729 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle