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Protein Overview: gi|224586099, gi...

General Information:
Name(s) found: gi|224586099 [NCBI NR]
gi|224470627 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|224586099|ref|YP_002639898.1| single-strand DNA-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] [NCBI NR]
  • gi|224470627|gb|ACN48457.1| single-strand DNA-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKGVNKVI LVGNLGQDPE VRYMPNGGAV VNLSLATSDT WTDKQTGDKK ERTEWHRVVL  60
   61 YGKLAEIASE YLRKGSQVYI EGALRTRKWT DQSGVEKYTT EVVVSQSGTM QMLGGRNSAG 120
  121 SGQQQGGWGQ PQQPAAPSHS GMPPQQHPAN EPPMDFDDDI PFAPFGHSVA RHALYVLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 53.69897 SINGLE STRANDED DNA BINDING PROTEIN AND SSDNA COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  2.26271782657431 bayes_pls_golite062009
  • binding
    		•  2.01819468874386 bayes_pls_golite062009
  • DNA binding
    		•  1.81052012500635 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  1.38758756313423 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.30327082958682 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.537716356194117 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.0989196136046104 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle