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Protein Overview: gi|18423700, gi|...

General Information:
Name(s) found: gi|18423700 [NCBI NR]
gi|14161419 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|18423700|ref|NP_568819.1| MYB120 (MYB DOMAIN PROTEIN 120); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14161419|gb|AAK54742.1|AF371979_1 putative transcription factor MYB120 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pollen tube growth [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMYGGGGAG KDGGSTNHLS DGGVILKKGP WTAAEDEILA AYVRENGEGN WNAVQKNTGL  60
   61 ARCGKSCRLR WANHLRPNLK KGSFTGDEER LIIQLHAQLG NKWARMAAQL PGRTDNEIKN 120
  121 YWNTRLKRLL RQGLPLYPPD IIPNHQLHPH PHHQQQQQHN HHHHHHQQQQ QHQQMYFQPQ 180
  181 SSQRNTPSSS PLPSPTPANA KSSSSFTFHT TTANLLHPLS PHTPNTPSQL SSTPPPPPLS 240
  241 SPLCSPRNNQ YPTLPLFALP RSQINNNNNG NFTFPRPPPL LQPPSSLFAK RYNNANTPLN 300
  301 CINRVSTAPF SPVSRDSYTS FLTLPYPSPT AQTATYHNTN NPYSSSPSFS LNPSSSSYPT 360
  361 STSSPSFLHS HYTPSSTSFH TNPVYSMKQE QLPSNQIPQI DGFNNVNNFT DNERQNHNLN 420
  421 SSGAHRRSSS CSLLEDVFEE AEALASGGRG RPPKRRQLTA SLPNHNNNTN NNDNFFSVSF 480
  481 GHYDSSDNLC SLQGKTKTTY NTSNLNYSSL QVKCKMFMIK TQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] PSI-BLAST 54.522879 c-Myb, DNA-binding domain
    2 View Details [135..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..523] MSA 4.184994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle