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Protein Overview: gi|213650272

General Information:
Name(s) found: gi|213650272 [NCBI NR]
Description(s) found:
  • gi|213650272|ref|ZP_03380325.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. J185
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALCPLLTP PASEALLLAQ ARQLSGYTLG ELAVMAGITT PKDLKRDKGW IGVLLEIWLG  60
   61 ASAGSKPEQD FAALGVELKT IPVDSLGRPL ETTFVCVAPL TGNSGVTWET SHVRHKLKRV 120
  121 LWVPVEGDRS IPLAERRVGS PLLWSPSEEE DRQLRLDWEE LMDMIVLGQV ERITARHGEV 180
  181 LQLRPKAANA RALTEAIGAR GEPILTLPRG FYLKKNFTQA LLARHFLLQN P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 119.0 DNA mismatch repair protein MutH from

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • double-stranded DNA binding
    		•  4.65596322324967 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  3.88121538069074 bayes_pls_golite062009
  • single-stranded DNA specific endodeoxyribonuclease activity
    		•  3.87045877570028 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  3.62965779224499 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  2.01277239394854 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.99560174672253 bayes_pls_golite062009
  • nuclease activity
    		•  1.92659045080864 bayes_pls_golite062009
  • endonuclease activity
    		•  1.6546965422816 bayes_pls_golite062009
  • damaged DNA binding
    		•  1.50475020123562 bayes_pls_golite062009
  • hydrolase activity
    		•  1.18004254197954 bayes_pls_golite062009
  • binding
    		•  0.940513659936693 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.878597940882332 bayes_pls_golite062009
  • catalytic activity
    		•  0.816447099398022 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.796780585758145 bayes_pls_golite062009
  • DNA binding
    		•  0.779318309058729 bayes_pls_golite062009
  • protein binding
    		•  0.458550636208588 bayes_pls_golite062009
  • DNA strand annealing activity
    		•  0.103710151681167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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