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Protein Overview: gi|190406691

General Information:
Name(s) found: gi|190406691 [NCBI NR]
Description(s) found:
  • gi|190406691|gb|EDV09958.1| guanine nucleotide exchange factor for cdc42 [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 854 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQTRFASG TSLSDLKPKP SATSISIPMQ NVMNKPVTEQ DSLFHICANI RKRLEVLPQL  60
   61 KPFLQLAYQS SEVLSERQSL LLSQKQHQEL LKSNGANRDS SDLAPTLRSS SISTATSLMS 120
  121 MEGISYTNSN PSATPNMEDT LLTFSMGILP ITMDCDPVTQ LSQLFQQGAP LCILFNSVKP 180
  181 QFKLPVIASD DLKVCKKSIY DFILGCKKHF AFNDEELFTI SDVFANSTSQ LVKVLEVVET 240
  241 LMNSSPTIFP SKSKTQQIMN AENQHRHQPQ QSSKKHNEYV KIIKEFVATE RKYVHDLEIL 300
  301 DKYRQQLLDS NLITSEELYM LFPNLGDAID FQRRFLISLE INALVEPSKQ RIGALFMHSK 360
  361 HFFKLYEPWS IGQNAAIEFL SSTLHKMRVD ESQRFIINNK LELQSFLYKP VQRLCRYPLL 420
  421 VKELLAESSD DNNTKELEAA LDISKNIARS INENQRRTEN HQVVKKLYGR VVNWKGYRIS 480
  481 KFGELLYFDK VFISTTNSSS EPEREFEVYL FEKIIILFSE VVTKKSASSL ILKKKSSTSA 540
  541 SISASNITDN NGSPHHSYHK RHSNSSSSNN IHLSSSSAAA IIHSSTNSSD NNSNNSSSSS 600
  601 LFKLSANEPK LDLRGRIMIM NLNQIIPQNN RSLNITWESI KEQGNFLLKF KNEETRDNWS 660
  661 SCLQQLIHDL KNEQFKARHH SSTSTTSSTA KSSSMMSPTT TMNTPNHHNS RQTHDSMASF 720
  721 SSSHMKRVSD VLPKRRTTSS SFESEIKSIS ENFKNSIPES SILFRISYNN NSNNTSSSEI 780
  781 FTLLVEKVWN FDDLIMAINS KISNTHNNNI SPITKIKYQD EDGDFVVLGS DEDWNVAKEM 840
  841 LAENNEKFLN IRLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] MSA 1.108997 View MSA. No confident structure predictions are available.
    2 View Details [134..253] PSI-BLAST 11.69897 Calponin
    3 View Details [254..458] PSI-BLAST 202.457575 GEF of TIAM1 (T-Lymphoma invasion and metastasis indusing protein 1)
    4 View Details [459..642] PSI-BLAST 202.457575 GEF of TIAM1 (T-Lymphoma invasion and metastasis indusing protein 1)
    5 View Details [643..754] MSA 1.061996 View MSA. No confident structure predictions are available.
    6 View Details [755..854] deduced N/A Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  2.24212855645397 bayes_pls_golite062009
  • protein binding
    		•  1.04550817342273 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.993282922991536 bayes_pls_golite062009
  • kinase activity
    		•  0.682664093464385 bayes_pls_golite062009
  • signal transducer activity
    		•  0.639296022362811 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.639296022362811 bayes_pls_golite062009
  • GTPase regulator activity
    		•  0.459633124432679 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  0.457933659119243 bayes_pls_golite062009
  • small GTPase regulator activity
    		•  0.390993828682912 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.217422685675578 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.0693380673720717 bayes_pls_golite062009
  • protein kinase activity
    		•  0.0278354564906339 bayes_pls_golite062009
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle