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Protein Overview: gi|47169313, gi|...

General Information:
Name(s) found: gi|47169315 [NCBI NR]
gi|47169313 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|47169315|pdb|1UW4|D Chain D, The Structural Basis Of The Interaction Between Nonsense Mediated Decay Factors Upf2 And Upf3 [NCBI NR]
  • gi|47169313|pdb|1UW4|B Chain B, The Structural Basis Of The Interaction Between Nonsense Mediated Decay Factors Upf2 And Upf3 [NCBI NR]
    • Organism: Homo sapiens
    Length: 248 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPPLQEYVRK LLYKDLSKVT TEKVLRQMRK LPWQDQEVKD YVICCMINIW NVKYNSIHCV  60
   61 ANLLAGLVLY QEDVGIHVVD GVLEDIRLGM EVNQPKFNQR RISSAKFLGE LYNYRMVESA 120
  121 VIFRTLYSFT SFGVNPDGSP SSLDPPEHLF RIRLVCTILD TCGQYFDRGS SKRKLDCFLV 180
  181 YFQRYVWWKK SLEVWTKDHP FPIDIDYMIS DTLELLRPKI KLCNSLEESI RQVQDLEREF 240
  241 LIKLGLVN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|13786858 gi|150261449 gi|219109210, gi... gi|47169313, gi|... gi|56554577

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 70.69897 The structural basis of the interaction between nonsense mediated decay factors UPF2 and UPF3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle