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Protein Overview: gi|47168797, gi|...

General Information:
Name(s) found: gi|47168797 [NCBI NR]
gi|47168796 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|47168797|pdb|1RKQ|B Chain B, Crystal Structure Of Had-Like Phosphatase Yida From E. Coli [NCBI NR]
  • gi|47168796|pdb|1RKQ|A Chain A, Crystal Structure Of Had-Like Phosphatase Yida From E. Coli [NCBI NR]
    • Organism: Escherichia coli
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAIKLIAI DMDGTLLLPD HTISPAVKNA IAAARARGVN VVLTTGRPYA GVHNYLKELH  60
   61 MEQPGDYCIT YNGALVQKAA DGSTVAQTAL SYDDYRFLEK LSREVGSHFH ALDRTTLYTA 120
  121 NRDISYYTVH ESFVATIPLV FCEAEKMDPN TQFLKVMMID EPAILDQAIA RIPQEVKEKY 180
  181 TVLKSAPYFL EILDKRVNKG TGVKSLADVL GIKPEEIMAI GDQENDIAMI EYAGVGVAVD 240
  241 NAIPSVKEVA NFVTKSNLED GVAFAIEKYV LNEGGSHHHH HH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|189095939, gi... gi|47168797, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 55.30103 Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55296860681783 bayes_pls_golite062009
  • hydrolase activity
    		•  0.996930438913923 bayes_pls_golite062009
  • phosphatase activity
    		•  0.0985887286442809 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.0342238658800214 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle