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Protein Overview: gi|167051285, gi...

General Information:
Name(s) found: gi|167398781 [NCBI NR]
gi|167051285 [NCBI NR]
Description(s) found:
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  • gi|167398781|ref|ZP_02304305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia pestis biovar Antiqua str. UG05-0454] [NCBI NR]
  • gi|167051285|gb|EDR62693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia pestis biovar Antiqua str. UG05-0454] [NCBI NR]
    • Organism: Yersinia pestis biovar Antiqua str. UG05-0454
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVSPHRD  60
   61 RSSLPTPHEI RHHLDDYVIG QEPAKKVLAV AVYNHYKRLR NGDTSNGIEL GKSNILLIGP 120
  121 TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI 180
  181 VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTIA AVPPQGGRKH PQQEFLQVDT 240
  241 SKILFICGGA FAGLDKVIGQ RINTGSGIGF GAVVKGQSEK ATEGELLSQV EPEDLIKFGL 300
  301 IPEFIGRLPV VATLSELSED ALIQILKEPK NALTKQYQAL FSLEGVELEF RDEALTAIAK 360
  361 KAMARKTGAR GLRSIVEGAL LDTMYDLPSM DSVEKVVVDE SVIAGQSAPM LIYGQPEAQA 420
  421 SGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] MSA 1.599991 View MSA. No confident structure predictions are available.
    2 View Details [64..423] PSI-BLAST 53.0 Crystal structure of helicobacter pylori ClpX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  2.55157966585974 bayes_pls_golite062009
  • binding
    		•  1.41264401383678 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
    		•  0.564275755355315 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.546796591575762 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.543610140926125 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.540750418412449 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.517457589081898 bayes_pls_golite062009
  • ATP binding
    		•  0.1860481660648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.152859582615242 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.138615225841109 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.030747546048349 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle