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Protein Overview: gi|37926514, gi|...

General Information:
Name(s) found: gi|67155876 [NCBI NR]
gi|37926517 [NCBI NR]
gi|37926516 [NCBI NR]
gi|37926515 [NCBI NR]
gi|37926514 [NCBI NR]
gi|27573644 [NCBI NR]
gi|27573643 [NCBI NR]
gi|27573642 [NCBI NR]
gi|27573641 [NCBI NR]
Description(s) found:
Found 19 descriptions.
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  • gi|67155876|ref|ZP_00417503.1| Isocitrate dehydrogenase NADP-dependent, monomeric type [Azotobacter vinelandii AvOP] [NCBI NR]
  • gi|37926517|pdb|1J1W|D Chain D, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Nadp+ [NCBI NR]
  • gi|37926516|pdb|1J1W|C Chain C, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Nadp+ [NCBI NR]
  • gi|37926515|pdb|1J1W|B Chain B, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Nadp+ [NCBI NR]
  • gi|37926514|pdb|1J1W|A Chain A, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Nadp+ [NCBI NR]
  • gi|27573644|pdb|1ITW|D Chain D, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Isocitrate And Mn [NCBI NR]
  • gi|27573643|pdb|1ITW|C Chain C, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Isocitrate And Mn [NCBI NR]
  • gi|27573642|pdb|1ITW|B Chain B, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Isocitrate And Mn [NCBI NR]
  • gi|27573641|pdb|1ITW|A Chain A, Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With Isocitrate And Mn [NCBI NR]
    • Organism: Azotobacter vinelandii
    Length: 741 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPKIIYTL TDEAPALATY SLLPIIKAFT GSSGIAVETR DISLAGRLIA TFPEYLTDTQ  60
   61 KISDDLAELG KLATTPDANI IKLPNISASV PQLKAAIKEL QQQGYKLPDY PEEPKTDTEK 120
  121 DVKARYDKIK GSAVNPVLRE GNSDRRAPLS VKNYARKHPH KMGAWSADSK SHVAHMDNGD 180
  181 FYGSEKAALI GAPGSVKIEL IAKDGSSTVL KAKTSVQAGE IIDSSVMSKN ALRNFIAAEI 240
  241 EDAKKQGVLL SVHLKATMMK VSDPIMFGQI VSEFYKDALT KHAEVLKQIG FDVNNGIGDL 300
  301 YARIKTLPEA KQKEIEADIQ AVYAQRPQLA MVNSDKGITN LHVPSDVIVD ASMPAMIRDS 360
  361 GKMWGPDGKL HDTKAVIPDR CYAGVYQVVI EDCKQHGAFD PTTMGSVPNV GLMAQKAEEY 420
  421 GSHDKTFQIP ADGVVRVTDE SGKLLLEQSV EAGDIWRMCQ AKDAPIQDWV KLAVNRARAT 480
  481 NTPAVFWLDP ARAHDAQVIA KVERYLKDYD TSGLDIRILS PVEATRFSLA RIREGKDTIS 540
  541 VTGNVLRDYL TDLFPIMELG TSAKMLSIVP LMSGGGLFET GAGGSAPKHV QQFLEEGYLR 600
  601 WDSLGEFLAL AASLEHLGNA YKNPKALVLA STLDQATGKI LDNNKSPARK VGEIDNRGSH 660
  661 FYLALYWAQA LAAQTEDKEL QAQFTGIAKA LTDNETKIVG ELAAAQGKPV DIAGYYHPNT 720
  721 DLTSKAMRPS ATFNAALAPL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..741] PSI-BLAST 1000.0 Monomeric isocitrate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • isocitrate dehydrogenase activity
    		•  3.62126393776639 bayes_pls_golite062009
  • catalytic activity
    		•  3.08295953338337 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.6468198750213 bayes_pls_golite062009
  • isocitrate dehydrogenase (NADP+) activity
    		•  2.29271552032599 bayes_pls_golite062009
  • isocitrate dehydrogenase (NAD+) activity
    		•  2.10234418832459 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47802406005381 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.44962743981001 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle