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Protein Overview: RPB9A_ARATH

General Information:
Name(s) found: RPB9A_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • DNA-directed RNA polymerases II, IV and V subunit 9A OS=Arabidopsis thaliana GN=NRPB9A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 114 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase V complex [IPI]
    DNA-directed RNA polymerase II, core complex [IPI]
    Biological Process: transcription [IEA][ISS]
    regulation of transcription [IEA]
    Molecular Function: nucleic acid binding [IEA]
    DNA binding [IEA][ISS]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [IEA][ISS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMKFCREC NNILYPKEDK EQKILLYACR NCDHQEVADN SCVYRNEVHH SVSERTQILT  60
   61 DVASDPTLPR TKAVRCSKCQ HREAVFFQAT ARGEEGMTLF FVCCNPNCGH RWRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 24.69897 RBP9 subunit of RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle