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Protein Overview: gi|15227266, gi|...

General Information:
Name(s) found: gi|44917427 [NCBI NR]
gi|15227266 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|44917427|gb|AAS49038.1| At2g19660 [Arabidopsis thaliana] [NCBI NR]
  • gi|15227266|ref|NP_179556.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 662 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVEVPPIH NHPLLPFTRF SYKACKGCGY VGYIYGGYHC NELGCESVFH KECADPLPEI  60
   61 NHYSHPDHPL KLLINVEPLA SCSQCPSSFE NGYLCSICDF KLDFRCATRL PLEFILEEST 120
  121 VHEHPIQLSD GTRDGFVQLC KTCKWGVFDA VHYKCNKCDL RFHVECTKLF PQASHVLHPQ 180
  181 HPLKLLRCEE APDYADNKCL LCGNKFDGRI HHCDVCNFTI CGGCMENPPP LSVVSPTTHE 240
  241 HQLYLLSKPL GFTCNACGTQ ADQSPYFCLQ CNFMIHWECI DLPRVININR HDHRISYTRR 300
  301 LGHGQNTCGV CRKKVDGFYG GYSCSKCSNY VVHSRCATDE DVWDMIELEG TPEEPEEDAP 360
  361 FEVIDDNTIK HFSHDHNLVI NKDGRILHES TLCKACVFQI CSDAFYSCEN CDFILHQKCA 420
  421 NLPRKKRHVC DNLPFTLVTN DTSDETSCDL CWQSFTGFRY ECLTRMVTLD VRCGSIREPL 480
  481 VHQSHQHPLY FSKRSSKSCT ECGKNMDLDI GSFSCDECDY SLDFKCALLP QKVKWHRYDD 540
  541 HPLYLSCGES SVDGEYWCEA CETKVNSKKW FYTCNDCGVI LHISCVVGDF SYYMPGSKIG 600
  601 WEEDLVVSNT SMCRPFCYVC NSQCKLPSIV KVVSKADVVL YICSLNCYYN FNRSNNYSSS 660
  661 DW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] FFAS03 2.0 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [68..133] PSI-BLAST 3.221849 No description for 2ysmA was found.
    3 View Details [134..327] PSI-BLAST 10.0 No description for 2i13A was found.
    4 View Details [328..506] FFAS03 2.17 No description for 2i13A was found.
    5 View Details [507..662] PSI-BLAST 3.30103 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle