YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|12006939, gi|...

General Information:
Name(s) found: gi|18424272 [NCBI NR]
gi|12006939 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|18424272|ref|NP_568912.1| VIP2; transcription regulator [Arabidopsis thaliana] [NCBI NR]
  • gi|12006939|gb|AAG44978.1|AF295433_1 VIP2 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 556 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: negative regulation of transcription [ISS]
    DNA integration [IMP]
    Molecular Function: protein binding [IPI]
    transcription regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGTLTSRNS SMNSIPSAGV QQPNGSFSSG RFASNNLPVN LSQLSHGSSH GHSGIPNRGL  60
   61 NVVGNPGFSS NANGVGGSIP GILSTSAGLS NRNSVPGMGI SQLLGNSGPR ITNSMGNMVG 120
  121 GGNLGRNISS GGLSIPGLSS RLNLAANSGS GLNVQGQNRM MGGVLPQGSQ VMSMLGNSYH 180
  181 TGGGPLSQNH VQSVNNMMLS DHPNDSSLFD INNDFPQLTS RPGSAGGTQG HLGSLRKQGL 240
  241 GVPLVQQNQE FSIQNEDFPA LPGYKGGNSE YPMDLHQKEQ LHDNAMSMMH SQNFSMGRSG 300
  301 GFNLGATYSS HRPQQQPQHT SSTGGLQGLG LRPLSSPNAV SSIGYDQLIQ QYQQHQNQSQ 360
  361 FPVQQMSSIN QFRDSEMKST QSEADPFCLL GLLDVLNRSN PELTSLALGI DLTTLGLDLN 420
  421 STGNLYKTFA SPWTNEPAKS EVEFTVPNCY YATEPPPLTR ASFKRFSYEL LFYTFYSMPK 480
  481 DEAQLYAADE LYERGWFYHK ELRVWFFRVG EPLVRAATYE RGTYEYLDPN SFKTVRKEHF 540
  541 VIKYELMEKR PSLLQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] PSI-BLAST 8.522879 No description for 1y0fB was found.
    2 View Details [417..556] Pfam 71.026872 No description for PF04153.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle