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Protein Overview: gi|110739057, gi...

General Information:
Name(s) found: gi|30699483 [NCBI NR]
gi|30699481 [NCBI NR]
gi|18412605 [NCBI NR]
gi|110739057 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|30699483|ref|NP_849911.1| DNAJ heat shock protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|30699481|ref|NP_849910.1| DNAJ heat shock protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18412605|ref|NP_565227.1| DNAJ heat shock protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110739057|dbj|BAF01446.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: response to heat [IEA]
    protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    ATP binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR  60
   61 NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR QYHPDVNKEP GATEKFKEIS 120
  121 AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD 180
  181 FGRTRRSRVT KGEDLRYDIT LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS 240
  241 TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP 300
  301 GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA 360
  361 VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI RGDHLFTVKV SVPNQISAGE 420
  421 RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN 480
  481 IKEFAGSVAN GALKWLRDNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..177] PSI-BLAST 20.39794 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    2 View Details [178..500] PSI-BLAST 46.69897 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • unfolded protein binding
    		•  3.04403163860617 bayes_pls_golite062009
  • chaperone binding
    		•  2.86745334638583 bayes_pls_golite062009
  • protein binding
    		•  2.65982681685488 bayes_pls_golite062009
  • binding
    		•  2.63138872417193 bayes_pls_golite062009
  • heat shock protein binding
    		•  2.17994194200939 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.91297632253219 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.6342534817623 bayes_pls_golite062009
  • DNA binding
    		•  1.55234338199368 bayes_pls_golite062009
  • transporter activity
    		•  1.29863098651348 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.812144232432417 bayes_pls_golite062009
  • protein transporter activity
    		•  0.599800483479766 bayes_pls_golite062009
  • Hsp70 protein binding
    		•  0.541755903922701 bayes_pls_golite062009
  • transferase activity
    		•  0.240656521918556 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0276971914937192 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  2.7298921704023 bayes_pls_golite062009
  • protein binding
    		•  2.6297172985864 bayes_pls_golite062009
  • protein disulfide isomerase activity
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
    		•  2.4409950647303 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
    		•  2.23398279564144 bayes_pls_golite062009
  • unfolded protein binding
    		•  2.04158808514315 bayes_pls_golite062009
  • receptor binding
    		•  0.395342079633271 bayes_pls_golite062009
  • catalytic activity
    		•  0.276917867171685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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