| Protein: | gi|110739057, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110739057, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
435.0 | [0..1] | [500..1] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR 60
61 NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR QYHPDVNKEP GATEKFKEIS 120
121 AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMD
|
| Detection Method: |  |
| Confidence: | 20.39794 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| chaperone binding | 2.86745334638583 | bayes_pls_golite062009 |
| protein binding | 2.65982681685488 | bayes_pls_golite062009 |
| binding | 2.63138872417193 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| transcription regulator activity | 1.91297632253219 | bayes_pls_golite062009 |
| nucleic acid binding | 1.6342534817623 | bayes_pls_golite062009 |
| DNA binding | 1.55234338199368 | bayes_pls_golite062009 |
| transporter activity | 1.29863098651348 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812144232432417 | bayes_pls_golite062009 |
| protein transporter activity | 0.599800483479766 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| transferase activity | 0.240656521918556 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0276971914937192 | bayes_pls_golite062009 |
|
Region A: Residues: [178-500] |
1 11 21 31 41 51
| | | | | |
1 QADFGRTRRS RVTKGEDLRY DITLELSEAI FGSEKEFDLT HLETCEACAG TGAKAGSKMR 60
61 ICSTCGGRGQ VMRTEQTPFG MFSQVSICPN CGGDGEVISE NCRKCSGEGR VRIKKSIKVK 120
121 IPPGVSAGSI LRVAGEGDSG PRGGPPGDLY VYLDVEDVRG IERDGINLLS TLSISYLDAI 180
181 LGAVVKVKTV EGDTELQIPP GTQPGDVLVL AKKGVPKLNR PSIRGDHLFT VKVSVPNQIS 240
241 AGERELLEEL ASLKDTSSNR SRTRAKPQQP STLSTAPSGS ENKKDEVKEE NEEPEQENYL 300
301 WNNIKEFAGS VANGALKWLR DNL
|
| Detection Method: | |
| Confidence: | 46.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.7298921704023 | bayes_pls_golite062009 |
| protein binding | 2.6297172985864 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 2.23398279564144 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| receptor binding | 0.395342079633271 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
