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Protein Overview: gi|22330245, gi|...

General Information:
Name(s) found: gi|42571867 [NCBI NR]
gi|22330245 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|42571867|ref|NP_974024.1| TAF6B4 (TBP-ASSOCIATED FACTOR 6B4); RNA polymerase II transcription factor/ transcription initiation factor [Arabidopsis thaliana] [NCBI NR]
  • gi|22330245|ref|NP_175838.2| TAF6B4 (TBP-ASSOCIATED FACTOR 6B4); RNA polymerase II transcription factor/ transcription initiation factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription factor activity [IEA]
    Molecular Function: transcription initiation factor activity [IEA]
    RNA polymerase II transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSILLFISG IWSLPLAPKV CGSRELLRTE IYTSSMTKMS SSRMLSKLLY QMHLLMHLFS  60
   61 HWLAIDGIQP SIPQNSPLQA ISDLKRSEYK DDGLAARQVL SKDLQIYFDK VTEWALTQSG 120
  121 STLFRQALAS LEIDPGLHPL VPFFTSFIAE EIVKNMDNYP ILLALMRLAR SLLHNPHVHI 180
  181 EPYLHQLMPS IITCLIAKRL GRRSSDNHWD LRNFTASTVA STCKRFGHVY HNLLPRVTRS 240
  241 LLHTFLDPTK ALPQHYGAIQ GMVALGLNMV RFLVLPNLGP YLLLLLPEMG LEKQKEEAKR 300
  301 HGAWLVYGAL MVAAGRCLYE RLKTSETLLS PPTSSVWKTN GKLTSPRQSK RKASSDNLTH 360
  361 QPPLKKIAVG GIIQMSSTQM QMRGTTTVPQ QSHTDADARH HNSPSTIAPK TSAAAGTDVD 420
  421 NYLFPLFEYF GESMLMFTPT HELSFFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] FFAS03 1.07 No description for 2ie3A was found.
    2 View Details [347..447] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.267627928716605 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle