YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22330245, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSILLFISG IWSLPLAPKV CGSRELLRTE IYTSSMTKMS SSRMLSKLLY QMHLLMHLFS  60
   61 HWLAIDGIQP SIPQNSPLQA ISDLKRSEYK DDGLAARQVL SKDLQIYFDK VTEWALTQSG 120
  121 STLFRQALAS LEIDPGLHPL VPFFTSFIAE EIVKNMDNYP ILLALMRLAR SLLHNPHVHI 180
  181 EPYLHQLMPS IITCLIAKRL GRRSSDNHWD LRNFTASTVA STCKRFGHVY HNLLPRVTRS 240
  241 LLHTFLDPTK ALPQHYGAIQ GMVALGLNMV RFLVLPNLGP YLLLLLPEMG LEKQKEEAKR 300
  301 HGAWLVYGAL MVAAGRCLYE RLKTSETLLS PPTSSVWKTN GKLTSPRQSK RKASSDNLTH 360
  361 QPPLKKIAVG GIIQMSSTQM QMRGTTTVPQ QSHTDADARH HNSPSTIAPK TSAAAGTDVD 420
  421 NYLFPLFEYF GESMLMFTPT HELSFFL

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	447	0.94