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Protein Overview: ERDL1_ARATH

General Information:
Name(s) found: ERDL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42561831|ref|NP_172364.3| sugar transporter family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|118572303|sp|Q9SCW7.2|ERDL1_ARATH RecName: Full=Sugar transporter ERD6-like 1; AltName: Full=Sugar transporter-like protein 4 [NCBI NR]
  • Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2 [Swiss-Prot]
  • sugar transporter family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Sugar transporter family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | sugar transporter family protein | chr1:2848377-2852019 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • carbohydrate transporter/ sugar porter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Major facilitator superfamily protein | chr1:2848374-2852016 FORWARD LENGTH=464 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [ISS]
    Biological Process: transmembrane transport [IEA]
    transport [IEA]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGSMKTPL VNNQEEARSS SSITCGLLLS TSVAVTGSFV YGCAMSYSSP AQSKIMEELG  60
   61 LSVADYSFFT SVMTLGGMIT AAFSGKIAAV IGRRQTMWIA DVFCIFGWLA VAFAHDKMLL 120
  121 NIGRGFLGFG VGLISYVVPV YIAEITPKAF RGGFSFSNQL LQSFGISLMF FTGNFFHWRT 180
  181 LALLSAIPCG IQMICLFFIP ESPRWLAMYG RERELEVTLK RLRGENGDIL EEAAEIRETV 240
  241 ETSRRESRSG LKDLFNMKNA HPLIIGLGLM LLQQFCGSSA ISAYAARIFD TAGFPSDIGT 300
  301 SILAVILVPQ SIIVMFAVDR CGRRPLLMSS SIGLCICSFL IGLSYYLQNH GDFQEFCSPI 360
  361 LIVGLVGYVL SFGIGLGGLP WVIMSEVFPV NVKITAGSLV TVSNWFFSWI IIFSFNFMMQ 420
  421 WSAFGTYFIF AGVSLMSFVF VWTLVPETKG RTLEDIQQSL GQLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 26.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alcohol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  6.54968363274124 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  5.40344495119017 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.3746965264994 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • binding
    		•  1.89539096965643 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar binding
    		•  0.285073104957756 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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