YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|42571729

General Information:
Name(s) found: gi|42571729 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|42571729|ref|NP_973955.1| MATE efflux family protein [Arabidopsis thaliana] [NCBI NR]
  • MATE efflux family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux family protein | chr1:11985732-11990177 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | MATE efflux family protein | chr1:11985752-11990197 FORWARD LENGTH=490 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • MATE efflux family protein OS=Arabidopsis thaliana GN=At1g33080 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q8RXK1, Protein DETOXIFICATION OS=Arabidopsis thaliana GN=At1g33080 PE=3 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARREGEVTE TLLKKSTENR GEDRDGLGMK EKVWRESKKL WVVAGPAIFT RFSTSGLSLI  60
   61 SQAFIGHLGS TELAAYSITL TVLLRFSNGI LLGMASALET LCGQAYGAKQ YHMLGIYLQR 120
  121 SWIVLTGCTI CLMPIYIFAG PILLALGQEE RLVRVARIIA LWVIGINISF VPSFTCQMFL 180
  181 QAQSKNKIIA YVAAVSLGVH VFLSWLLVVH FDFGIAGAMT SSLVAHWLPN IAQVLFVTCG 240
  241 GCTETWRGFS WLAFKDLWPV FKLSVSSGGM ICLELWYNSI LILLTGNLKN AEVALNALAI 300
  301 CININALEMM VAFGFMAAAS VRVSNEIGSG NSNGAKFATM VVVSTSLSIG IIFFFIFLFL 360
  361 RERVSYIFTT SEAVATQVAD LSPLLAFSIL LNSIQPVLSG VAVGAGWQKY VTVVNLACYY 420
  421 LVGIPSGLFL GYVVGLQVKG VWLGMIFGIF VQTCVLTVMT MRTDWDQQVC KSNIIGFLVE 480
  481 NYKYFFLVII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] Pfam 38.60206 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [261..490] Pfam 30.958607 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle