YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Y1044_ARATH

General Information:
Name(s) found: Y1044_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 665 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: response to light stimulus [IEA][ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA  60
   61 SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN VVYLRCAAEH LEMTEEHGEG 120
  121 NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG 180
  181 WPVVEHGGPM QSPGGSVLWN GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI 240
  241 REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR 300
  301 MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY 360
  361 DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ SITPMTAVAK LIDGYLAEVA 420
  421 PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS 480
  481 LEACTHAAQN ERLPLRIIVQ VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN 540
  541 EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG 600
  601 VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS 660
  661 ISSER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 19.39794 No description for 2nn2A was found.
    2 View Details [150..264] MSA 1.645994 View MSA. No confident structure predictions are available.
    3 View Details [265..375] MSA 1.098984 View MSA. No confident structure predictions are available.
    4 View Details [376..459] deduced N/A No confident structure predictions are available.
    5 View Details [460..665] MSA 3.077978 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle