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View Structure Prediction Details

Protein: Y1044_ARATH
Organism: Arabidopsis thaliana
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1044_ARATH.

Description E-value Query
Range
Subject
Range
gi|25336228, gi|... - gi|6634762|gb|AAF19742.1|AC009917_1 Contains a bZIP transcription factor PF|00170 domain. ESTs gb|R...
719.0 [0..4] [665..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA  60
   61 SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN VVYLRCAAEH LEMTEEHGEG 120
  121 NLISQTETFF NQVVLKSWKD SIKALHSCD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.39794
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [150-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVLEYADELN ITKKCIESLA MRASTDPNLF GWPVVEHGGP MQSPGGSVLW NGISTGARPK  60
   61 HTSSDWWYED ASMLSFPLFK RLITVMESRG IREDIIAGSL TYYTRKHLPG LKRRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [265-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGPESSGRFS TPLGSGNVLS EEEQKNLLEE IQELLRMQKG LVPTKFFVDM LRIAKILKAS  60
   61 PDCIANLEKR IGMQLDQAAL EDLVMPSFSH TMETLYDVDS VQRILDHFLG T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [376-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQIMPGGVGS PCSSVDDGNL IGSPQSITPM TAVAKLIDGY LAEVAPDVNL KLPKFQALAA  60
   61 SIPEYARLLD DGLYRAIDIY LKHH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [460-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PWLAETEREN LCRLLDCQKL SLEACTHAAQ NERLPLRIIV QVLFFEQLQL RTSVAGCFLV  60
   61 SDNLDGGSRQ LRSGGYVGGP NEGGGGGGGW ATAVRENQVL KVGMDSMRMR VCELEKECSN 120
  121 MRQEIEKLGK TTKGGGSASN GVGSKTWENV SKKLGFGFKL KSHQMCSAQE GSVSKSNNEN 180
  181 VKIEKLKDVK ERRGKHKKAS SISSER

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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