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Protein Overview: gi|22327873

General Information:
Name(s) found: gi|22327873 [NCBI NR]
Description(s) found:
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  • gi|22327873|ref|NP_680442.1| ATP binding / nucleotide binding / phenylalanine-tRNA ligase [Arabidopsis thaliana] [NCBI NR]
  • hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hypothetical protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | chr5:22726982-22728035 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Domain of unknown function (DUF2431) | chr5:22709756-22710809 FORWARD LENGTH=256 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At5g56075 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 256 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: phenylalanyl-tRNA aminoacylation [IEA]
    translation [IEA]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA]
    phenylalanine-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRILNIYLS NYINAHKVRR VKLLVNKQNQ TFNTSLTHAS INTYVYQFIC RYTWCEMQTN  60
   61 VQETKRLRHY TNKQKILLVG EGDFSFSLSL ARAFGSASNL TATSLDTQGE LEQKFKNGKA 120
  121 NVEELERLGC SVVYGVNVHS MITKPSVGGS AIYDRVIFNF PTHELVRGFM KSARVLVKDE 180
  181 DKGGEIHVIH KTEYPFSEWK LKTLGEKEGL DLIREVEFCL SHYPGYFNKR GSGGYSDSSF 240
  241 PVGKSSTFMF TKQFFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] FFAS03 1.1 Crystal Structure of Human Catechol-O-methyltransferase domain containing 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.639646908254091 bayes_pls_golite062009
  • transferase activity
    		•  0.394707018913607 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0810339077201343 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0737551340470768 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle