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Protein Overview: gi|30696554

General Information:
Name(s) found: gi|30696554 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30696554|ref|NP_851193.1| FIP2; protein binding / voltage-gated potassium channel [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEA]
    membrane [IEA]
    Biological Process: potassium ion transport [IEA]
    Molecular Function: voltage-gated potassium channel activity [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSSNLSSM VRLNIGGKKF CTTIDTLTIR EPDSMLAAMF SGRHAMCQES KKGYVFIDRD  60
   61 GKHFRHILNW LRDGVIPSLS DPDCSELLRE ADYYQLLGLK DGIKDSRKEV GEVEAELTRI 120
  121 DIIKCIQTER VRFRGVNLSG IDLSKLDLSL VDFSYACLRN VFFSRTNLQC AKFRNADAEG 180
  181 SIFHNAILRE CEFTSANLRG ALLAGTNLQS ANLQDACLVG CSFCGADLRT AHLQNADLTN 240
  241 ANLEGANLEG ANLKGAKLSN ANFKGANLQR AYLRHVNLRE AVSPKPILGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] PSI-BLAST 20.30103 Potassium channel kv4.2
    2 View Details [108..290] PSI-BLAST 33.522879 No description for 2j8kA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.03849401453298 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle