| Protein: | gi|30696554 |
| Organism: | Arabidopsis thaliana |
| Length: | 290 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30696554.
| Description | E-value | Query Range |
Subject Range |
|
|
246.0 | [0..1] | [289..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 METSSNLSSM VRLNIGGKKF CTTIDTLTIR EPDSMLAAMF SGRHAMCQES KKGYVFIDRD 60
61 GKHFRHILNW LRDGVIPSLS DPDCSELLRE ADYYQLLGLK DGIKDSR
|
| Detection Method: |  |
| Confidence: | 20.30103 |
| Match: | 1nn7A |
| Description: | Potassium channel kv4.2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.03849401453298 | bayes_pls_golite062009 |
|
Region A: Residues: [108-290] |
1 11 21 31 41 51
| | | | | |
1 KEVGEVEAEL TRIDIIKCIQ TERVRFRGVN LSGIDLSKLD LSLVDFSYAC LRNVFFSRTN 60
61 LQCAKFRNAD AEGSIFHNAI LRECEFTSAN LRGALLAGTN LQSANLQDAC LVGCSFCGAD 120
121 LRTAHLQNAD LTNANLEGAN LEGANLKGAK LSNANFKGAN LQRAYLRHVN LREAVSPKPI 180
181 LGY
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 2j8kA |
| Description: | No description for 2j8kA was found. |
