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Protein Overview: gi|118405294, gi...

General Information:
Name(s) found: gi|30694832 [NCBI NR]
gi|118405294 [NCBI NR]
gi|118405288 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|30694832|ref|NP_199395.2| DOG1 (DELAY OF GERMINATION 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|118405294|gb|ABK81213.1| DOG1 alpha splice variant [Arabidopsis thaliana] [NCBI NR]
  • gi|118405288|gb|ABK81210.1| DOG1 alpha splice variant [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: seed dormancy [IMP]
    abscisic acid mediated signaling pathway [IMP]
    sugar mediated signaling pathway [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSKNIEQ AQDSYLEWMS LQSQRIPELK QLLAQRRSHG DEDNDNKLRK LTGKIIGDFK  60
   61 NYAAKRADLA HRCSSNYYAP TWNSPLENAL IWMGGCRPSS FFRLVYALCG SQTEIRVTQF 120
  121 LRNIDGYESS GGGGGASLSD LSAEQLAKIN VLHVKIIDEE EKMTKKVSSL QEDAADIPIA 180
  181 TVAYEMENVG EPNVVVDQAL DKQEEAMARL LVEADNLRVD TLAKILGILS PVQGADFLLA 240
  241 GKKLHLSMHE WGTMRDRRRR DCMVDTEVIF DACTTVNSGP RPTETTNNER N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] MSA 5.038974 View MSA. No confident structure predictions are available.
    2 View Details [211..291] MSA 1.03499 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle