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View Structure Prediction Details

Protein: gi|118405294, gi...
Organism: Arabidopsis thaliana
Length: 291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|118405294, gi....

Description E-value Query
Range
Subject
Range
gi|110737212 - gi|110737212|dbj|BAF00554.1| tumor-related protein-like [Arabidopsis thaliana]
345.0 [0..18] [291..1]
gi|28630431, gi|... - pir||T01415 basic leucine zipper protein - maize, gi|2865394|gb|AAC39351.1| basic leucine zipper pr...
296.0 [0..2] [278..279]
gi|15148924 - gi|15148924|gb|AAK84889.1|AF402608_1 TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgari...
295.0 [0..3] [261..241]
TGA21_TOBAC - TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1
294.0 [0..10] [264..235]
gi|113367202 - gi|113367202|gb|ABI34658.1| bZIP transcription factor bZIP99 [Glycine max]
292.0 [0..3] [261..241]
HBP1C_WHEAT - Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2
292.0 [0..3] [261..250]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSSKNIEQ AQDSYLEWMS LQSQRIPELK QLLAQRRSHG DEDNDNKLRK LTGKIIGDFK  60
   61 NYAAKRADLA HRCSSNYYAP TWNSPLENAL IWMGGCRPSS FFRLVYALCG SQTEIRVTQF 120
  121 LRNIDGYESS GGGGGASLSD LSAEQLAKIN VLHVKIIDEE EKMTKKVSSL QEDAADIPIA 180
  181 TVAYEMENVG EPNVVVDQAL DKQEEAMARL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVEADNLRVD TLAKILGILS PVQGADFLLA GKKLHLSMHE WGTMRDRRRR DCMVDTEVIF  60
   61 DACTTVNSGP RPTETTNNER N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.854 N/A N/A a.7.16 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle