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Protein Overview: ROGFA_ARATH

General Information:
Name(s) found: ROGFA_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|93007382|gb|ABE97194.1| hypothetical protein At5g19560 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239773|ref|NP_197457.1| ROPGEF10 (ROP UANINE NUCLEOTIDE EXCHANGE FACTOR 10); Rho guanyl-nucleotide exchange factor [Arabidopsis thaliana] [NCBI NR]
  • Rop guanine nucleotide exchange factor 10 OS=Arabidopsis thaliana GN=ROPGEF10 PE=2 SV=1 [Swiss-Prot]
  • hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATROPGEF10, ROPGEF10 | ATROPGEF10/ROPGEF10 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/ | chr5:6603293-6606132 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein At5g19560 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleotide exchange factor 10 | chr5:6603291-6606130 FORWARD LENGTH=493 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ROP uanine nucleotide exchange factor 10 OS=Arabidopsis thaliana GN=ROPGEF10 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 493 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: Rho guanyl-nucleotide exchange factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDGRNSGHS SFSSRGDGMH TPEHELAGHA APSTRRGKQN RRSDMEVMKE RFAKLLLGED  60
   61 MSGGGTGETS ALALSNAITK LADSMFGEQM KLQPMYPETK ENWRKEMGWL LSVIDHIVQF 120
  121 VPSRQMGKNG QFTEIMVTKQ RDDLLTNIPA LRKLDSVLLE TLDNFKDQKD FWYVPRDMED 180
  181 ADHNGDWRRD ENWWLPVVKV PTDGLSEESR RWLQNQKDSV AQVLKAATAI NAHVLSEMHV 240
  241 PENYIDSLPK NGKTSLGDFL YKSITEESFD PDYFVSFLDL STEHKVLDLK NRIEASMVIW 300
  301 KRKMCQKEKD GKSQWGSTVS LEKRELFEVR AETILVMLKQ QFPGIPQSSL EVSKIKNNKD 360
  361 VGQAILESYS RVLESLASKI MSRIEDVLEA DRLVQRQLMG EAETRSESEA ESEYEETEKV 420
  421 VAAETPNSRK LSDFIGWRLS SDTKKHSSMS DIEFFHKVEQ EKEKPMMKSP RALPKKFSYL 480
  481 AKLENMRSPS DRH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..402] PSI-BLAST 1000.0 No description for 2ntxA was found.
    2 View Details [403..493] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle