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Protein Overview: DCAM4_ARATH

General Information:
Name(s) found: DCAM4_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • S-adenosylmethionine decarboxylase proenzyme 4 OS=Arabidopsis thaliana GN=SAMDC4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: spermidine biosynthetic process [IEA]
    spermine biosynthetic process [IEA]
    Molecular Function: adenosylmethionine decarboxylase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSGFEGFE KRLELRFFDD DKPITKNPMG LRLIDFESLD QVLNEVQCTV VSAVANRSFD  60
   61 AYVLSESSLF VYPTKIIIKT CGTTQLLKSI RPLIHLARNL GLTLRACRYS RGSFIFPKAQ 120
  121 PFPYTSFKDE VIVVEESLPK SLCYRKASVM TPSNNPSRAW HVFTASADVE SDEHVVVVEV 180
  181 CMTELDRVNA RSFFKRKGDE KNNSDSAGKE MTRLSGIDNI NANAYICDFA FDPCGYSMNG 240
  241 VDGDRYSTIH VTPEDGFSYA SFECGLSLYD NGHEDISEVL SRAIDVFRPS DVSIATTYGG 300
  301 EDYNHEVTKR VERVLAKKLD LKCRSRLMDE FPGSGTVVYQ SFTPRRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] PSI-BLAST 21.69897 S-adenosylmethionine decarboxylase
    2 View Details [67..347] PSI-BLAST 101.0 Crystal structure of S-adenosylmethionine decarboxylase from potato

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • adenosylmethionine decarboxylase activity
    		•  6.97190143843809 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.68228786608236 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.55250570844159 bayes_pls_golite062009
  • binding
    		•  1.4725833406744 bayes_pls_golite062009
  • catalytic activity
    		•  1.25843830926101 bayes_pls_golite062009
  • lyase activity
    		•  0.834955527171148 bayes_pls_golite062009
  • protein binding
    		•  0.443666756110255 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle