| Protein: | DCAM4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 347 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCAM4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
470.0 | [0..1] | [345..7] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MAVSGFEGFE KRLELRFFDD DKPITKNPMG LRLIDFESLD QVLNEVQCTV VSAVANRSFD 60
61 AYVLSE
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1mhmB |
| Description: | S-adenosylmethionine decarboxylase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [67-347] |
1 11 21 31 41 51
| | | | | |
1 SSLFVYPTKI IIKTCGTTQL LKSIRPLIHL ARNLGLTLRA CRYSRGSFIF PKAQPFPYTS 60
61 FKDEVIVVEE SLPKSLCYRK ASVMTPSNNP SRAWHVFTAS ADVESDEHVV VVEVCMTELD 120
121 RVNARSFFKR KGDEKNNSDS AGKEMTRLSG IDNINANAYI CDFAFDPCGY SMNGVDGDRY 180
181 STIHVTPEDG FSYASFECGL SLYDNGHEDI SEVLSRAIDV FRPSDVSIAT TYGGEDYNHE 240
241 VTKRVERVLA KKLDLKCRSR LMDEFPGSGT VVYQSFTPRR K
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 1mhmA |
| Description: | Crystal structure of S-adenosylmethionine decarboxylase from potato |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| adenosylmethionine decarboxylase activity | 6.97190143843809 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 2.68228786608236 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.55250570844159 | bayes_pls_golite062009 |
| binding | 1.4725833406744 | bayes_pls_golite062009 |
| catalytic activity | 1.25843830926101 | bayes_pls_golite062009 |
| lyase activity | 0.834955527171148 | bayes_pls_golite062009 |
| protein binding | 0.443666756110255 | bayes_pls_golite062009 |
