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Protein Overview: CPR30_ARATH

General Information:
Name(s) found: CPR30_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30682162|ref|NP_192993.2| F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145333023|ref|NP_001078377.1| F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|142989747|sp|Q9SU30.2|FB233_ARATH RecName: Full=F-box protein At4g12560 [NCBI NR]
  • F-box protein At4g12560 OS=Arabidopsis thaliana GN=At4g12560 PE=2 SV=2 [Swiss-Prot]
  • F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2 [Swiss-Prot]
  • F-box family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | F-box family protein | chr4:7441812-7443154 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 413 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: negative regulation of defense response [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIPMDIVN DIFLRLPAKT LVRCRALSKP CYHLINDPDF IESHLHRVLQ TGDHLMILLR  60
   61 GALRLYSVDL DSLDSVSDVE HPMKRGGPTE VFGSSNGLIG LSNSPTDLAV FNPSTRQIHR 120
  121 LPPSSIDLPD GSSTRGYVFY GLGYDSVSDD YKVVRMVQFK IDSEDELGCS FPYEVKVFSL 180
  181 KKNSWKRIES VASSIQLLFY FYYHLLYRRG YGVLAGNSLH WVLPRRPGLI AFNLIVRFDL 240
  241 ALEEFEIVRF PEAVANGNVD IQMDIGVLDG CLCLMCNYDQ SYVDVWMMKE YNVRDSWTKV 300
  301 FTVQKPKSVK SFSYMRPLVY SKDKKKVLLE LNNTKLVWFD LESKKMSTLR IKDCPSSYSA 360
  361 ELVVSSLVLG CKGDLNNIKY RKEQQAKEAR EAKIMQNTKR RDDFLSKGFK LVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..413] PSI-BLAST 17.0 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle