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Protein Overview: BBX20_ARATH

General Information:
Name(s) found: BBX20_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|22329252|ref|NP_195618.2| zinc finger (B-box type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|114050581|gb|ABI49440.1| At4g39070 [Arabidopsis thaliana] [NCBI NR]
  • B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1 SV=1 [Swiss-Prot]
  • zinc finger (B-box type) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger (B-box type) family protein, salt-tolerance protein - Arabidopsis thaliana, PID:e224078 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger (B-box type) family protein | chr4:18205055-18206415 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcription factor/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g39070 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | B-box zinc finger family protein | chr4:18205061-18206421 REVERSE LENGTH=242 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 242 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    response to chitin [IEP]
    Molecular Function: zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIWCAVCDK EEASVFCCAD EAALCNGCDR HVHFANKLAG KHLRFSLTSP TFKDAPLCDI  60
   61 CGERRALLFC QEDRAILCRE CDIPIHQANE HTKKHNRFLL TGVKISASPS AYPRASNSNS 120
  121 AAAFGRAKTR PKSVSSEVPS SASNEVFTSS SSTTTSNCYY GIEENYHHVS DSGSGSGCTG 180
  181 SISEYLMETL PGWRVEDLLE HPSCVSYEDN IITNNNNSES YRVYDGSSQF HHQGFWDHKP 240
  241 FS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] FFAS03 1.01 Cytochrome c nitrite reductase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle