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View Structure Prediction Details

Protein: BBX20_ARATH
Organism: Arabidopsis thaliana
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBX20_ARATH.

Description E-value Query
Range
Subject
Range
gi|26452767 - gi|26452767|dbj|BAC43464.1| putative zinc finger protein [Arabidopsis thaliana]
179.0 [0..1] [242..1]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIWCAVCDK EEASVFCCAD EAALCNGCDR HVHFANKLAG KHLRFSLTSP TFKDAPLCDI  60
   61 CGERRALLFC QEDRAILCRE CDIPIHQANE HTKKHNRFLL TGVKISASPS AYPRASNSNS 120
  121 AAAFGRAKTR PKSVSSEVPS SASNEVFTSS SSTTTSNCYY GIEENYHHVS DSGSGSGCTG 180
  181 SISEYLMETL PGWRVEDLLE HPSCVSYEDN IITNNNNSES YRVYDGSSQF HHQGFWDHKP 240
  241 FS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1fs9A
Description: Cytochrome c nitrite reductase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle