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Protein Overview: VAL2_ARATH

General Information:
Name(s) found: VAL2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75320503|sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein VP1/ABI3-LIKE 2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1 [NCBI NR]
  • gi|60677679|dbj|BAD90971.1| transcription factor B3-EAR motif family [Arabidopsis thaliana] [NCBI NR]
  • gi|42567319|ref|NP_194929.2| HSL1 (HSI2-LIKE 1); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1 [Swiss-Prot]
  • transcriptional factor B3 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transcriptional factor B3 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HSL1, HSI2-L1 | HSI2-L1/HSL1 (HSI2-LIKE 1); transcription factor | chr4:15481237-15484903 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • transcription factor B3-EAR motif family [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:15481231-15484897 FORWARD LENGTH=780 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 780 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of seed germination [IGI]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR  60
   61 ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI SMNVSHESNG KDFPSFASAE 120
  121 HVGSVLERTN LKHLLHFQRI DPTHSSLQMK QEESLLPSSL DALRHKTERK ELSAQPNLSI 180
  181 SLGPTLMTSP FHDAAVDDRS KTNSIFQLAP RSRQLLPKPA NSAPIAAGME PSGSLVSQIH 240
  241 VARPPPEGRG KTQLLPRYWP RITDQELLQL SGQYPHLSNS KIIPLFEKVL SASDAGRIGR 300
  301 LVLPKACAEA YFPPISLPEG LPLKIQDIKG KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM 360
  361 QLQAGDTVTF SRTEPEGKLV MGYRKATNST ATQMFKGSSE PNLNMFSNSL NPGCGDINWS 420
  421 KLEKSEDMAK DNLFLQSSLT SARKRVRNIG TKSKRLLIDS VDVLELKITW EEAQELLRPP 480
  481 QSTKPSIFTL ENQDFEEYDE PPVFGKRTLF VSRQTGEQEQ WVQCDACGKW RQLPVDILLP 540
  541 PKWSCSDNLL DPGRSSCSAP DELSPREQDT LVRQSKEFKR RRLASSNEKL NQSQDASALN 600
  601 SLGNAGITTT GEQGEITVAA TTKHPRHRAG CSCIVCSQPP SGKGKHKPSC TCTVCEAVKR 660
  661 RFRTLMLRKR NKGEAGQASQ QAQSQSECRD ETEVESIPAV ELAAGENIDL NSDPGASRVS 720
  721 MMRLLQAAAF PLEAYLKQKA ISNTAGEQQS SDMVSTEHGS SSAAQETEKD TTNGAHDPVN 780
  781

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] FFAS03 0.952 Nuclear corepressor KAP-1 (TIF-1beta)
    2 View Details [113..270] MSA 1.108997 View MSA. No confident structure predictions are available.
    3 View Details [271..396] PSI-BLAST 31.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    4 View Details [397..506] deduced N/A No confident structure predictions are available.
    5 View Details [507..580] MSA 18.112995 View MSA. No confident structure predictions are available.
    6 View Details [581..668] MSA 2.071994 View MSA. No confident structure predictions are available.
    7 View Details [669..780] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.148252783584283 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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