| Protein: | VAL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
966.0 | [0..1] | [780..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MESIKVCMNA LCGAASTSGE WKKGWPMRSG DLASLCDKCG CAYEQSIFCE VFHAKESGWR 60
61 ECNSCDKRLH CGCIASRFMM ELLENGGVTC ISCAKKSGLI SMNVSHESNG KD
|
| Detection Method: |  |
| Confidence: | 0.952 |
| Match: | 1fp0A |
| Description: | Nuclear corepressor KAP-1 (TIF-1beta) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.148252783584283 | bayes_pls_golite062009 |
|
Region A: Residues: [113-270] |
1 11 21 31 41 51
| | | | | |
1 FPSFASAEHV GSVLERTNLK HLLHFQRIDP THSSLQMKQE ESLLPSSLDA LRHKTERKEL 60
61 SAQPNLSISL GPTLMTSPFH DAAVDDRSKT NSIFQLAPRS RQLLPKPANS APIAAGMEPS 120
121 GSLVSQIHVA RPPPEGRGKT QLLPRYWPRI TDQELLQL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [271-396] |
1 11 21 31 41 51
| | | | | |
1 SGQYPHLSNS KIIPLFEKVL SASDAGRIGR LVLPKACAEA YFPPISLPEG LPLKIQDIKG 60
61 KEWVFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRTEPEGKLV MGYRKATNST 120
121 ATQMFK
|
| Detection Method: | |
| Confidence: | 31.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [397-506] |
1 11 21 31 41 51
| | | | | |
1 GSSEPNLNMF SNSLNPGCGD INWSKLEKSE DMAKDNLFLQ SSLTSARKRV RNIGTKSKRL 60
61 LIDSVDVLEL KITWEEAQEL LRPPQSTKPS IFTLENQDFE EYDEPPVFGK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [507-580] |
1 11 21 31 41 51
| | | | | |
1 RTLFVSRQTG EQEQWVQCDA CGKWRQLPVD ILLPPKWSCS DNLLDPGRSS CSAPDELSPR 60
61 EQDTLVRQSK EFKR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [581-668] |
1 11 21 31 41 51
| | | | | |
1 RRLASSNEKL NQSQDASALN SLGNAGITTT GEQGEITVAA TTKHPRHRAG CSCIVCSQPP 60
61 SGKGKHKPSC TCTVCEAVKR RFRTLMLR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [669-780] |
1 11 21 31 41 51
| | | | | |
1 KRNKGEAGQA SQQAQSQSEC RDETEVESIP AVELAAGENI DLNSDPGASR VSMMRLLQAA 60
61 AFPLEAYLKQ KAISNTAGEQ QSSDMVSTEH GSSSAAQETE KDTTNGAHDP VN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
